RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 CYP2W1Q8TAV3 490 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 POTEMA6NI47 508 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 CDK11BP21127 795 aaKnown RBP13.25□□□□□ -0.29
LIN28A-201ENST00000254231 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
LIN28A-201ENST00000254231 ZBTB9Q96C00 473 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 ZNF668Q96K58 619 aaPredicted RBP13.25□□□□□ -0.29
LIN28A-201ENST00000254231 TMEM60Q9H2L4 133 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 ADCY7P51828 1080 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 TYRO3Q06418 890 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
LIN28A-201ENST00000254231 TPD52L1Q16890 204 aaPredicted RBP13.24□□□□□ -0.29
LIN28A-201ENST00000254231 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 SMC2O95347 1197 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 CDR1P51861 262 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 HTRA3P83110 453 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 ZNF543Q08ER8 600 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 TNFAIP1Q13829 316 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 BRAPQ7Z569 592 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 KCNG4Q8TDN1 519 aa13.24□□□□□ -0.29
LIN28A-201ENST00000254231 SYMPKQ92797 1274 aaKnown RBP13.24□□□□□ -0.29
LIN28A-201ENST00000254231 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
LIN28A-201ENST00000254231 RANBP2P49792 3224 aaKnown RBP13.24□□□□□ -0.29
LIN28A-201ENST00000254231 STAT3P40763 770 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 GRM4Q14833 912 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 FBXO11Q86XK2 927 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
LIN28A-201ENST00000254231 STAT2P52630 851 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
LIN28A-201ENST00000254231 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 AOPEPQ8N6M6 819 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 CCPG1Q9ULG6 757 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 MRE11P49959 708 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 CCDC17Q96LX7 622 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 NMRK2Q9NPI5 230 aa13.23□□□□□ -0.29
LIN28A-201ENST00000254231 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
LIN28A-201ENST00000254231 RILPL1Q5EBL4 403 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 AGBL3Q8NEM8 1001 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 PDE4CQ08493 712 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 NONOQ15233 471 aaKnown RBP eCLIP13.22□□□□□ -0.29
LIN28A-201ENST00000254231 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
LIN28A-201ENST00000254231 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 GPRC5DQ9NZD1 345 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 PPP1R12BO60237 982 aaPredicted RBP13.22□□□□□ -0.29
LIN28A-201ENST00000254231 GNA11P29992 359 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 SLC39A14Q15043 492 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 ENOX2Q16206 610 aaKnown RBP13.22□□□□□ -0.29
LIN28A-201ENST00000254231 CEP57L1Q8IYX8 460 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
LIN28A-201ENST00000254231 RCOR1Q9UKL0 485 aa13.22□□□□□ -0.29
LIN28A-201ENST00000254231 TESPA1A2RU30 521 aaPredicted RBP13.21□□□□□ -0.29
LIN28A-201ENST00000254231 ASNSP08243 561 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 PTMSP20962 102 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 CAP2P40123 477 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 GABPAQ06546 454 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 SUGT1Q9Y2Z0 365 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 CSADQ9Y600 493 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 LY75O60449 1722 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 PALM3A6NDB9 673 aaPredicted RBP13.21□□□□□ -0.29
LIN28A-201ENST00000254231 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 NCAPH2Q6IBW4 605 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
LIN28A-201ENST00000254231 SIAH1Q8IUQ4 282 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 PCDHA4Q9UN74 947 aa13.21□□□□□ -0.29
LIN28A-201ENST00000254231 SCN9AQ15858 1988 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 PPP1R11O60927 126 aaPredicted RBP13.21□□□□□ -0.3
LIN28A-201ENST00000254231 PRR29P0C7W0 189 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 PTGS1P23219 599 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 DPCR1Q3MIW9 517 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 RPAP3Q9H6T3 665 aaPredicted RBP13.21□□□□□ -0.3
LIN28A-201ENST00000254231 PCDHA6Q9UN73 950 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 PCDHA8Q9Y5H6 950 aa13.21□□□□□ -0.3
LIN28A-201ENST00000254231 STAT6P42226 847 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 CUL5Q93034 780 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 ATG4CQ96DT6 458 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 IDI2Q9BXS1 227 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 TMX1Q9H3N1 280 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 GINS2Q9Y248 185 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 MYO3BQ8WXR4 1341 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 STXBP3O00186 592 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
LIN28A-201ENST00000254231 FUT2Q10981 343 aa13.2□□□□□ -0.3
LIN28A-201ENST00000254231 GMLQ99445 158 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms