RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 RASGRP2Q7LDG7 609 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 SPATA20Q8TB22 786 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 PSMB7Q99436 277 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 H3BQF6 201 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 SEMA3EO15041 775 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 ZMYND10O75800 440 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 LDHCP07864 332 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 TUBGCP2Q9BSJ2 902 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 ABCB6Q9NP58 842 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 HDAC6Q9UBN7 1215 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 RTCBQ9Y3I0 505 aaKnown RBP20.66■□□□□ 0.9
LRP3-201ENST00000253193 G3V3G9 751 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 ORC4O43929 436 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 SRGAP2O75044 1071 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 AMPD3Q01432 767 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 DCAF8Q5TAQ9 597 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 SH3RF1Q7Z6J0 888 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 RRP36Q96EU6 259 aaKnown RBP20.66■□□□□ 0.9
LRP3-201ENST00000253193 SLC39A2Q9NP94 309 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 FAM205AQ6ZU69 1335 aa20.66■□□□□ 0.9
LRP3-201ENST00000253193 KRT83P78385 493 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 CYP27A1Q02318 531 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 RAD51AP2Q09MP3 1159 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
LRP3-201ENST00000253193 TEX11Q8IYF3 940 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 JAKMIP2Q96AA8 810 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 FAM207AQ9NSI2 230 aaPredicted RBP20.65■□□□□ 0.9
LRP3-201ENST00000253193 LAMB4A4D0S4 1761 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 PKD1L3Q7Z443 1732 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 C6orf229H3BNL8 230 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 AKR1B10O60218 316 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 PLCG1P19174 1290 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 NONOQ15233 471 aaKnown RBP eCLIP20.65■□□□□ 0.9
LRP3-201ENST00000253193 IL17AQ16552 155 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 ARL6IP4Q66PJ3 421 aaKnown RBP20.65■□□□□ 0.9
LRP3-201ENST00000253193 TXLNBQ8N3L3 684 aa20.65■□□□□ 0.9
LRP3-201ENST00000253193 RNF225M0QZC1 329 aaPredicted RBP20.64■□□□□ 0.9
LRP3-201ENST00000253193 CACNA2D4Q7Z3S7 1137 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 FBXO33Q7Z6M2 555 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 MB21D1Q8N884 522 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 LINC00116Q8NCU8 138 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 RPGRQ92834 1020 aaKnown RBP20.64■□□□□ 0.9
LRP3-201ENST00000253193 HPS3Q969F9 1004 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 EYA3Q99504 573 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 FUT8Q9BYC5 575 aa20.64■□□□□ 0.9
LRP3-201ENST00000253193 LIMA1Q9UHB6 759 aaKnown RBP20.64■□□□□ 0.9
LRP3-201ENST00000253193 TJP1Q07157 1748 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 GSTO1P78417 241 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 KIF5AQ12840 1032 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 PDXDC2PQ6P474 469 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 ZNF384Q8TF68 577 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 CCDC181Q5TID7 509 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 WDR66Q8TBY9 1149 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 C8orf37Q96NL8 207 aa20.64■□□□□ 0.89
LRP3-201ENST00000253193 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.89
LRP3-201ENST00000253193 MPHOSPH10O00566 681 aaKnown RBP20.63■□□□□ 0.89
LRP3-201ENST00000253193 GNA11P29992 359 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 TNNI2P48788 182 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 TDRD12Q587J7 1177 aaKnown RBP20.63■□□□□ 0.89
LRP3-201ENST00000253193 RSRC2Q7L4I2 434 aaKnown RBP20.63■□□□□ 0.89
LRP3-201ENST00000253193 LCMT1Q9UIC8 334 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 FAM114A1Q8IWE2 563 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 FRMPD2Q68DX3 1309 aaPredicted RBP20.63■□□□□ 0.89
LRP3-201ENST00000253193 MTRQ99707 1265 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 SAR1BQ9Y6B6 198 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 ADAMTSL3P82987 1691 aa20.63■□□□□ 0.89
LRP3-201ENST00000253193 BICDL2A1A5D9 508 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 N4BP1O75113 896 aaKnown RBP20.62■□□□□ 0.89
LRP3-201ENST00000253193 OR52Z1P0C646 297 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 PMS1P54277 932 aaKnown RBP20.62■□□□□ 0.89
LRP3-201ENST00000253193 WHAMMP3Q1A5X7 153 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 DGKHQ86XP1 1220 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 TMEM47Q9BQJ4 181 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 CRACR2AQ9BSW2 395 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 GPCPD1Q9NPB8 672 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 ATP8B1O43520 1251 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 DNM2P50570 870 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 TXNRD1Q16881 649 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
LRP3-201ENST00000253193 TMEM266Q2M3C6 531 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 TYW1BQ6NUM6 668 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 CNOT6LQ96LI5 555 aaKnown RBP20.62■□□□□ 0.89
LRP3-201ENST00000253193 PNKPQ96T60 521 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 CWC15Q9P013 229 aaKnown RBP20.62■□□□□ 0.89
LRP3-201ENST00000253193 PCDHA6Q9UN73 950 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 PCDHA8Q9Y5H6 950 aa20.62■□□□□ 0.89
LRP3-201ENST00000253193 USO1O60763 962 aaKnown RBP20.61■□□□□ 0.89
LRP3-201ENST00000253193 KRT18P05783 430 aaKnown RBP20.61■□□□□ 0.89
LRP3-201ENST00000253193 E2F4Q16254 413 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
LRP3-201ENST00000253193 TRIM66O15016 1216 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 UFL1O94874 794 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 VSNL1P62760 191 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 NPY5RQ15761 445 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 EPS15P42566 896 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 C12orf60Q5U649 245 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 SV2BQ7L1I2 683 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 ADSSL1Q8N142 457 aa20.61■□□□□ 0.89
LRP3-201ENST00000253193 NOA1Q8NC60 698 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms