RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 NAALADL2Q58DX5 795 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 NEK8Q86SG6 692 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 MRIQ9BWK5 157 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 LETM2Q2VYF4 491 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 STRIP1Q5VSL9 837 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 CDKAL1Q5VV42 579 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 REXO1Q8N1G1 1221 aaKnown RBP28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 RMND1Q9NWS8 449 aa28.48■■■□□ 2.15
TMEM55B-201ENST00000250489 SLX4Q8IY92 1834 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 A0A1B0GTH6 734 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 CCNT1O60563 726 aaKnown RBP28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 RPN1P04843 607 aaKnown RBP28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 OR52Z1P0C646 297 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 UBA7P41226 1012 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 ZNF543Q08ER8 600 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 NR1I3Q14994 352 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 DACT2Q5SW24 774 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 RRAGBQ5VZM2 374 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 APTXQ7Z2E3 356 aaKnown RBP28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 GPCPD1Q9NPB8 672 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 ZNF646O15015 1829 aaPredicted RBP28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 RGPD3A6NKT7 1758 aaPredicted RBP28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 RGPD4Q7Z3J3 1758 aa28.47■■■□□ 2.15
TMEM55B-201ENST00000250489 SPECC1LQ69YQ0 1117 aa28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 KIAA0825Q8IV33 1275 aa28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 ZFPM1Q8IX07 1006 aa28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 BIN2Q9UBW5 565 aaPredicted RBP28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 CTNND2Q9UQB3 1225 aa28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 ECE2O60344 883 aa28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 ZNF658Q5TYW1 1059 aaPredicted RBP28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 TBCKQ8TEA7 893 aa28.46■■■□□ 2.15
TMEM55B-201ENST00000250489 SCN9AQ15858 1988 aa28.45■■■□□ 2.15
TMEM55B-201ENST00000250489 ORC2Q13416 577 aaPredicted RBP28.45■■■□□ 2.14
TMEM55B-201ENST00000250489 JAKMIP3Q5VZ66 844 aa28.45■■■□□ 2.14
TMEM55B-201ENST00000250489 TSC1Q92574 1164 aa28.45■■■□□ 2.14
TMEM55B-201ENST00000250489 PPP1R13BQ96KQ4 1090 aa28.45■■■□□ 2.14
TMEM55B-201ENST00000250489 AK8Q96MA6 479 aa28.45■■■□□ 2.14
TMEM55B-201ENST00000250489 PCDHAC2Q9Y5I4 1007 aa28.45■■■□□ 2.14
TMEM55B-201ENST00000250489 HDLBPQ00341 1268 aaKnown RBP28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 GOLGA8FQ08AF8 430 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 GOLGA8DPQ0D2H9 430 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 RASSF8Q8NHQ8 419 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 COA7Q96BR5 231 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 TMEM260Q9NX78 707 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 SIPA1L1O43166 1804 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 MPHOSPH10O00566 681 aaKnown RBP28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 RRP9O43818 475 aaKnown RBP28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 CCDC17Q96LX7 622 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 DNAJC18Q9H819 358 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 JMJD4Q9H9V9 463 aa28.44■■■□□ 2.14
TMEM55B-201ENST00000250489 SLURP2P0DP57 97 aa28.43■■■□□ 2.14
TMEM55B-201ENST00000250489 ADCY7P51828 1080 aa28.43■■■□□ 2.14
TMEM55B-201ENST00000250489 ZNF219Q9P2Y4 722 aaPredicted RBP28.43■■■□□ 2.14
TMEM55B-201ENST00000250489 RWDD2AQ9UIY3 292 aa28.43■■■□□ 2.14
TMEM55B-201ENST00000250489 CHRNA5P30532 468 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 CACNB3P54284 484 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 TMEM139Q8IV31 216 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 ZNF592Q92610 1267 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 KIF2AO00139 706 aaPredicted RBP28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 CTIFO43310 598 aaKnown RBP28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 RXRBP28702 533 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 PPP1R18Q6NYC8 613 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 ADGRF4Q8IZF3 695 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 IDI2Q9BXS1 227 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 DHX36Q9H2U1 1008 aaKnown RBP28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 KBTBD4Q9NVX7 518 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 MYH4Q9Y623 1939 aa28.42■■■□□ 2.14
TMEM55B-201ENST00000250489 PNMA6FA0A0J9YX94 578 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 MYL1P05976 194 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 PPP4R3BQ5MIZ7 849 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 GPATCH4Q5T3I0 446 aaKnown RBP28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 CABP7Q86V35 215 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 LRRC15Q8TF66 581 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 CNKSR1Q969H4 720 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 ADD3Q9UEY8 706 aaKnown RBP28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 FAM198AQ9UFP1 575 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 PAK1Q13153 545 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 TTBK2Q6IQ55 1244 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 TC2NQ8N9U0 490 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 CTAGE1Q96RT6 745 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 CUEDC2Q9H467 287 aa28.41■■■□□ 2.14
TMEM55B-201ENST00000250489 ATP2B2Q01814 1243 aa28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 TCP10Q12799 353 aa28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 HSP90AA2PQ14568 343 aaPredicted RBP28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 KCNB1Q14721 858 aa28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 PLIN2Q99541 437 aa28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 MAGEF1Q9HAY2 307 aa28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 GDAQ9Y2T3 454 aa28.4■■■□□ 2.14
TMEM55B-201ENST00000250489 DDTLA6NHG4 134 aaPredicted RBP28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 TEX33O43247 280 aa28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 PPP1R11O60927 126 aaPredicted RBP28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 RBM5P52756 815 aaKnown RBP eCLIP28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 CCDC96Q2M329 555 aa28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 POTEDQ86YR6 584 aa28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 C7orf43Q8WVR3 580 aa28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 NELFBQ8WX92 580 aa28.39■■■□□ 2.14
TMEM55B-201ENST00000250489 CCP110O43303 1012 aa28.39■■■□□ 2.13
TMEM55B-201ENST00000250489 KLRC4O43908 158 aa28.39■■■□□ 2.13
TMEM55B-201ENST00000250489 PLCG1P19174 1290 aa28.39■■■□□ 2.13
TMEM55B-201ENST00000250489 FCHSD1Q86WN1 690 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms