RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TC2NQ8N9U0 490 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 DISC1Q9NRI5 854 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 TRIM49BA6NDI0 452 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 RPN1P04843 607 aaKnown RBP17.8■□□□□ 0.44
LRFN1-201ENST00000248668 SRGNP10124 158 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 SLC16A2P36021 539 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 LONP1P36776 959 aaKnown RBP17.8■□□□□ 0.44
LRFN1-201ENST00000248668 SHROOM1Q2M3G4 852 aaPredicted RBP17.8■□□□□ 0.44
LRFN1-201ENST00000248668 TOGARAM2Q6ZUX3 1019 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 KIAA0825Q8IV33 1275 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 LRRC15Q8TF66 581 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 VPS16Q9H269 839 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 ZFP91Q96JP5 570 aaPredicted RBP17.8■□□□□ 0.44
LRFN1-201ENST00000248668 PES1O00541 588 aaKnown RBP17.79■□□□□ 0.44
LRFN1-201ENST00000248668 GTPBP6O43824 516 aaPredicted RBP17.79■□□□□ 0.44
LRFN1-201ENST00000248668 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.44
LRFN1-201ENST00000248668 NR1I3Q14994 352 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 NAALADL2Q58DX5 795 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 LRRN4CLQ8ND94 238 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 TBCKQ8TEA7 893 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 PDHBP11177 359 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 TECP42680 631 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 ARL6IP4Q66PJ3 421 aaKnown RBP17.79■□□□□ 0.44
LRFN1-201ENST00000248668 TTBK2Q6IQ55 1244 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 TMEM139Q8IV31 216 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 NELFBQ8WX92 580 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 TAB2Q9NYJ8 693 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
LRFN1-201ENST00000248668 IGSF22Q8N9C0 903 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 FAM163AQ96GL9 167 aaPredicted RBP17.79■□□□□ 0.44
LRFN1-201ENST00000248668 SPZ1Q9BXG8 430 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 MTMR4Q9NYA4 1195 aa17.79■□□□□ 0.44
LRFN1-201ENST00000248668 UTRNP46939 3433 aa17.78■□□□□ 0.44
LRFN1-201ENST00000248668 PRCPP42785 496 aa17.78■□□□□ 0.44
LRFN1-201ENST00000248668 NONOQ15233 471 aaKnown RBP eCLIP17.78■□□□□ 0.44
LRFN1-201ENST00000248668 APTXQ7Z2E3 356 aaKnown RBP17.78■□□□□ 0.44
LRFN1-201ENST00000248668 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
LRFN1-201ENST00000248668 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
LRFN1-201ENST00000248668 A0A1B0GTH6 734 aa17.78■□□□□ 0.44
LRFN1-201ENST00000248668 RBL2Q08999 1139 aa17.78■□□□□ 0.44
LRFN1-201ENST00000248668 TBX2Q13207 712 aaPredicted RBP17.78■□□□□ 0.44
LRFN1-201ENST00000248668 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
LRFN1-201ENST00000248668 PAK1Q13153 545 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 KCTD1Q719H9 257 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 POTEDQ86YR6 584 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 SOWAHDA6NJG2 315 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 MYO1BO43795 1136 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 TXKP42681 527 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 CCDC96Q2M329 555 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 CDC42EP5Q6NZY7 148 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 GJA10Q969M2 543 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 SERPINB13Q9UIV8 391 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.44
LRFN1-201ENST00000248668 N4BP3O15049 544 aa17.77■□□□□ 0.43
LRFN1-201ENST00000248668 PLCG1P19174 1290 aa17.77■□□□□ 0.43
LRFN1-201ENST00000248668 UBE2SQ16763 222 aa17.77■□□□□ 0.43
LRFN1-201ENST00000248668 REXO1Q8N1G1 1221 aaKnown RBP17.77■□□□□ 0.43
LRFN1-201ENST00000248668 LZTS2Q9BRK4 669 aa17.77■□□□□ 0.43
LRFN1-201ENST00000248668 MORC2Q9Y6X9 1032 aaPredicted RBP17.77■□□□□ 0.43
LRFN1-201ENST00000248668 MYH1P12882 1939 aa17.77■□□□□ 0.43
LRFN1-201ENST00000248668 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
LRFN1-201ENST00000248668 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
LRFN1-201ENST00000248668 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
LRFN1-201ENST00000248668 FANCGO15287 622 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 PMS1P54277 932 aaKnown RBP17.76■□□□□ 0.43
LRFN1-201ENST00000248668 KRT31Q15323 416 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 ELF2Q15723 593 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 PPFIBP1Q86W92 1011 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
LRFN1-201ENST00000248668 REXO1L1PQ8IX06 675 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 CDK5RAP2Q96SN8 1893 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 A0A0U1RQJ8 604 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 ARHGAP6O43182 974 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 OR52Z1P0C646 297 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 NPR1P16066 1061 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 GNA11P29992 359 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 KMT5BQ4FZB7 885 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 CDKAL1Q5VV42 579 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 NEK8Q86SG6 692 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 CABP7Q86V35 215 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 DAGLBQ8NCG7 672 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 ATRIPQ8WXE1 791 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 HPS3Q969F9 1004 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
LRFN1-201ENST00000248668 CASP14P31944 242 aa17.75■□□□□ 0.43
LRFN1-201ENST00000248668 TNNI2P48788 182 aa17.75■□□□□ 0.43
LRFN1-201ENST00000248668 KRT25Q7Z3Z0 450 aa17.75■□□□□ 0.43
LRFN1-201ENST00000248668 CCDC12Q8WUD4 166 aaPredicted RBP17.75■□□□□ 0.43
LRFN1-201ENST00000248668 FILIP1LQ4L180 1135 aa17.75■□□□□ 0.43
LRFN1-201ENST00000248668 ZNF658Q5TYW1 1059 aaPredicted RBP17.75■□□□□ 0.43
LRFN1-201ENST00000248668 ANKRD7Q92527 254 aa17.75■□□□□ 0.43
LRFN1-201ENST00000248668 AKR1B15C9JRZ8 316 aaPredicted RBP17.74■□□□□ 0.43
LRFN1-201ENST00000248668 URI1O94763 535 aaPredicted RBP17.74■□□□□ 0.43
LRFN1-201ENST00000248668 TDP2O95551 362 aa17.74■□□□□ 0.43
LRFN1-201ENST00000248668 ETF1P62495 437 aaKnown RBP17.74■□□□□ 0.43
LRFN1-201ENST00000248668 IRX2Q9BZI1 471 aaPredicted RBP17.74■□□□□ 0.43
LRFN1-201ENST00000248668 GABPAQ06546 454 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms