RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 HOMER2Q9NSB8 354 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 FBXO2Q9UK22 296 aaPredicted RBP15.26■□□□□ 0.03
NCLN-201ENST00000246117 POTEMA6NI47 508 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 ABCB4P21439 1286 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 RASSF7Q02833 373 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
NCLN-201ENST00000246117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.26■□□□□ 0.03
NCLN-201ENST00000246117 ERCC5P28715 1186 aaPredicted RBP15.25■□□□□ 0.03
NCLN-201ENST00000246117 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
NCLN-201ENST00000246117 MRPL12P52815 198 aaKnown RBP15.25■□□□□ 0.03
NCLN-201ENST00000246117 PRR16Q569H4 304 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 NEK8Q86SG6 692 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 TRIML1Q8N9V2 468 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
NCLN-201ENST00000246117 GSTTP1A0A1W2PQM5 241 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 SORBS3O60504 671 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
NCLN-201ENST00000246117 TMTC3Q6ZXV5 915 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 SRGAP1Q7Z6B7 1085 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 TMEM260Q9NX78 707 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 CEP104O60308 925 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 UHMK1Q8TAS1 419 aaKnown RBP15.25■□□□□ 0.03
NCLN-201ENST00000246117 ABCB6Q9NP58 842 aa15.25■□□□□ 0.03
NCLN-201ENST00000246117 EVX2Q03828 476 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 KRT25Q7Z3Z0 450 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 NAA15Q9BXJ9 866 aaKnown RBP15.24■□□□□ 0.03
NCLN-201ENST00000246117 MCM3P25205 808 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 C2orf54Q08AI8 447 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 NBPF11Q86T75 865 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 PCDHA12Q9UN75 941 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 PRPF3O43395 683 aaKnown RBP15.24■□□□□ 0.03
NCLN-201ENST00000246117 FAM13AO94988 1023 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 CSF1RP07333 972 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 VAV2P52735 878 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 KLHL30Q0D2K2 578 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 TERF2Q15554 542 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 ARHGAP44Q17R89 818 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 RASGRP2Q7LDG7 609 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 MARCH10Q8NA82 808 aaPredicted RBP15.24■□□□□ 0.03
NCLN-201ENST00000246117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.24■□□□□ 0.03
NCLN-201ENST00000246117 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
NCLN-201ENST00000246117 H7C1D1 291 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■■■□□ 15.6
NCLN-201ENST00000246117 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
NCLN-201ENST00000246117 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 KIAA1024Q9UPX6 916 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 MFAP3LO75121 409 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 CFAP58Q5T655 872 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 CCDC174Q6PII3 467 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 LSM14BQ9BX40 385 aaKnown RBP15.23■□□□□ 0.03
NCLN-201ENST00000246117 FCER1AP12319 257 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 ZSCAN20P17040 1043 aaPredicted RBP15.23■□□□□ 0.03
NCLN-201ENST00000246117 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
NCLN-201ENST00000246117 RAD9BQ6WBX8 426 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 GPBP1Q86WP2 473 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 ATP8A2Q9NTI2 1148 aa15.23■□□□□ 0.03
NCLN-201ENST00000246117 TTC26A0AVF1 554 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 TOB1P50616 345 aaPredicted RBP15.22■□□□□ 0.03
NCLN-201ENST00000246117 EHHADHQ08426 723 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 CCDC65Q8IXS2 484 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 PCDHA4Q9UN74 947 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 GOLGA6CA6NDK9 693 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 GOLGA6BA6NDN3 693 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 NDUFA10O95299 355 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 GCNT3O95395 438 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 GOLGA6DP0CG33 693 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 DNM2P50570 870 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 TRIM28Q13263 835 aaKnown RBP15.22■□□□□ 0.03
NCLN-201ENST00000246117 ERMNQ8TAM6 284 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 FAM76AQ8TAV0 307 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 UBLCP1Q8WVY7 318 aaPredicted RBP15.22■□□□□ 0.03
NCLN-201ENST00000246117 GOLGA6AQ9NYA3 693 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 DDAH1O94760 285 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 MOCS3O95396 460 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 PLCG2P16885 1265 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 AFAP1L1Q8TED9 768 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 RABGGTAQ92696 567 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 DBNDD1Q9H9R9 158 aa15.22■□□□□ 0.03
NCLN-201ENST00000246117 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 FTCDO95954 541 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
NCLN-201ENST00000246117 ITPK1Q13572 414 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 PLCD4Q9BRC7 762 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 ADGRG1Q9Y653 693 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 GDF11O95390 407 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 HNRNPH2P55795 449 aaKnown RBP15.21■□□□□ 0.03
NCLN-201ENST00000246117 PTPAQ15257 358 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 TCP11X2Q5H9J9 407 aa15.21■□□□□ 0.03
NCLN-201ENST00000246117 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms