RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 PPP1R12BO60237 982 aaPredicted RBP21.31■■□□□ 1
SNX17-201ENST00000233575 YEATS4O95619 227 aa21.31■■□□□ 1
SNX17-201ENST00000233575 MBD3O95983 291 aa21.31■■□□□ 1
SNX17-201ENST00000233575 MAP3K9P80192 1104 aa21.31■■□□□ 1
SNX17-201ENST00000233575 FMR1Q06787 632 aaKnown RBP eCLIP21.31■■□□□ 1
SNX17-201ENST00000233575 ZNF713Q8N859 430 aaPredicted RBP21.31■■□□□ 1
SNX17-201ENST00000233575 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
SNX17-201ENST00000233575 KIFC2Q96AC6 838 aa21.31■■□□□ 1
SNX17-201ENST00000233575 SMCHD1A6NHR9 2005 aa21.31■■□□□ 1
SNX17-201ENST00000233575 BACE1P56817 501 aa21.31■■□□□ 1
SNX17-201ENST00000233575 GALNT17Q6IS24 598 aa21.31■■□□□ 1
SNX17-201ENST00000233575 C6orf50Q9HD87 102 aa21.31■■□□□ 1
SNX17-201ENST00000233575 ESYT2A0FGR8 921 aa21.3■■□□□ 1
SNX17-201ENST00000233575 SPTLC2O15270 562 aa21.3■■□□□ 1
SNX17-201ENST00000233575 VCAM1P19320 739 aa21.3■■□□□ 1
SNX17-201ENST00000233575 MARCKSP29966 332 aaPredicted RBP21.3■■□□□ 1
SNX17-201ENST00000233575 ME1P48163 572 aa21.3■■□□□ 1
SNX17-201ENST00000233575 LPAR1Q92633 364 aa21.3■■□□□ 1
SNX17-201ENST00000233575 AS3MTQ9HBK9 375 aa21.3■■□□□ 1
SNX17-201ENST00000233575 TMEM63CQ9P1W3 806 aa21.3■■□□□ 1
SNX17-201ENST00000233575 PCDHA7Q9UN72 937 aa21.3■■□□□ 1
SNX17-201ENST00000233575 PCDHA1Q9Y5I3 950 aa21.3■■□□□ 1
SNX17-201ENST00000233575 TRAF5O00463 557 aa21.29■■□□□ 1
SNX17-201ENST00000233575 WDR46O15213 610 aaKnown RBP21.29■■□□□ 1
SNX17-201ENST00000233575 SLC39A14Q15043 492 aa21.29■■□□□ 1
SNX17-201ENST00000233575 USH1GQ495M9 461 aa21.29■■□□□ 1
SNX17-201ENST00000233575 FAM177A1Q8N128 213 aaPredicted RBP21.29■■□□□ 1
SNX17-201ENST00000233575 TMEM260Q9NX78 707 aa21.29■■□□□ 1
SNX17-201ENST00000233575 BIN2Q9UBW5 565 aaPredicted RBP21.29■■□□□ 1
SNX17-201ENST00000233575 GNA11P29992 359 aa21.29■■□□□ 1
SNX17-201ENST00000233575 HMGCS2P54868 508 aa21.29■■□□□ 1
SNX17-201ENST00000233575 FEM1BQ9UK73 627 aa21.29■■□□□ 1
SNX17-201ENST00000233575 AFG3L2Q9Y4W6 797 aa21.29■■□□□ 1
SNX17-201ENST00000233575 MRVI1Q9Y6F6 885 aa21.29■■□□□ 1
SNX17-201ENST00000233575 GOLGA6L4A6NEF3 574 aa21.28■■□□□ 1
SNX17-201ENST00000233575 LIG1P18858 919 aa21.28■■□□□ 1
SNX17-201ENST00000233575 ADCY7P51828 1080 aa21.28■■□□□ 1
SNX17-201ENST00000233575 KCNG4Q8TDN1 519 aa21.28■■□□□ 1
SNX17-201ENST00000233575 CHURC1Q8WUH1 139 aa21.28■■□□□ 1
SNX17-201ENST00000233575 CLMNQ96JQ2 1002 aa21.28■■□□□ 1
SNX17-201ENST00000233575 PLA2G6O60733 806 aa21.28■■□□□ 1
SNX17-201ENST00000233575 NF2P35240 595 aa21.28■■□□□ 1
SNX17-201ENST00000233575 USP14P54578 494 aa21.28■■□□□ 1
SNX17-201ENST00000233575 TTLL12Q14166 644 aaPredicted RBP21.28■■□□□ 1
SNX17-201ENST00000233575 UBE2SQ16763 222 aa21.28■■□□□ 1
SNX17-201ENST00000233575 JAKMIP3Q5VZ66 844 aa21.28■■□□□ 1
SNX17-201ENST00000233575 PPP1R18Q6NYC8 613 aa21.28■■□□□ 1
SNX17-201ENST00000233575 CCDC174Q6PII3 467 aa21.28■■□□□ 1
SNX17-201ENST00000233575 FBXO11Q86XK2 927 aa21.28■■□□□ 1
SNX17-201ENST00000233575 ZNF526Q8TF50 670 aaPredicted RBP21.28■■□□□ 1
SNX17-201ENST00000233575 AMNQ9BXJ7 453 aa21.28■■□□□ 1
SNX17-201ENST00000233575 TANGO6Q9C0B7 1094 aa21.28■■□□□ 1
SNX17-201ENST00000233575 CCDC194A0A1B0GVG4 234 aa21.27■■□□□ 1
SNX17-201ENST00000233575 IREB2P48200 963 aaKnown RBP21.27■■□□□ 1
SNX17-201ENST00000233575 INF2Q27J81 1249 aa21.27■■□□□ 1
SNX17-201ENST00000233575 FAM160B2Q86V87 743 aa21.27■■□□□ 1
SNX17-201ENST00000233575 REXO1Q8N1G1 1221 aaKnown RBP21.27■■□□□ 1
SNX17-201ENST00000233575 BICD2Q8TD16 824 aa21.27■■□□□ 1
SNX17-201ENST00000233575 RANBP17Q9H2T7 1088 aaKnown RBP21.27■■□□□ 1
SNX17-201ENST00000233575 RPAP3Q9H6T3 665 aaPredicted RBP21.27■■□□□ 1
SNX17-201ENST00000233575 NMRK2Q9NPI5 230 aa21.27■■□□□ 1
SNX17-201ENST00000233575 CSADQ9Y600 493 aa21.27■■□□□ 1
SNX17-201ENST00000233575 ZNF174Q15697 407 aa21.26■□□□□ 0.99
SNX17-201ENST00000233575 TTC38Q5R3I4 469 aa21.26■□□□□ 0.99
SNX17-201ENST00000233575 ELP3Q9H9T3 547 aa21.26■□□□□ 0.99
SNX17-201ENST00000233575 RIC8AQ9NPQ8 531 aa21.26■□□□□ 0.99
SNX17-201ENST00000233575 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.26■□□□□ 0.99
SNX17-201ENST00000233575 NOL7Q9UMY1 257 aaKnown RBP21.26■□□□□ 0.99
SNX17-201ENST00000233575 AXDND1Q5T1B0 1012 aaPredicted RBP21.26■□□□□ 0.99
SNX17-201ENST00000233575 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
SNX17-201ENST00000233575 PARP14Q460N5 1801 aa21.25■□□□□ 0.99
SNX17-201ENST00000233575 SLF1Q9BQI6 1058 aa21.25■□□□□ 0.99
SNX17-201ENST00000233575 GOLPH3LQ9H4A5 285 aa21.25■□□□□ 0.99
SNX17-201ENST00000233575 ZNF408Q9H9D4 720 aa21.25■□□□□ 0.99
SNX17-201ENST00000233575 PTPRFP10586 1907 aa21.25■□□□□ 0.99
SNX17-201ENST00000233575 USP17L15C9J2P7 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L13C9JLJ4 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L11C9JVI0 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L18D6R9N7 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L22D6RA61 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L17D6RBQ6 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L19D6RCP7 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L20D6RJB6 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 PPP6R2O75170 966 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 FLOT1O75955 427 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L24Q0WX57 530 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 ADALQ6DHV7 355 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 USP17L6PQ6QN14 398 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 CUL5Q93034 780 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 CLIC6Q96NY7 704 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 OPLAHO14841 1288 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 CLK2P49760 499 aaKnown RBP21.24■□□□□ 0.99
SNX17-201ENST00000233575 GRIN1Q05586 938 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 MAP3K11Q16584 847 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 CCAR1Q8IX12 1150 aaKnown RBP21.24■□□□□ 0.99
SNX17-201ENST00000233575 ANKRD13AQ8IZ07 590 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 C12orf42Q96LP6 360 aa21.24■□□□□ 0.99
SNX17-201ENST00000233575 C19orf81C9J6K1 198 aa21.23■□□□□ 0.99
SNX17-201ENST00000233575 MCM7P33993 719 aa21.23■□□□□ 0.99
SNX17-201ENST00000233575 TRAPPC10P48553 1259 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms