RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SLC35F6Q8N357 371 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 PNKPQ96T60 521 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 FAM107BQ9H098 131 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 RTL9Q8NET4 1388 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 N4BP3O15049 544 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 CAMTA2O94983 1202 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 NTSR2O95665 410 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 SCP2P22307 547 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 RCAN1P53805 252 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 SRGAP1Q7Z6B7 1085 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 MTA3Q9BTC8 594 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 ACBD3Q9H3P7 528 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 KIF5CO60282 957 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 KLRK1P26718 216 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 ATP2C1P98194 919 aaPredicted RBP10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 SMIM5Q71RC9 77 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 FERMT2Q96AC1 680 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 TFR2Q9UP52 801 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 GDAQ9Y2T3 454 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 ZMYND10O75800 440 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 CYP2D6P10635 497 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 FILIP1LQ4L180 1135 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 PDXDC2PQ6P474 469 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 TMTC3Q6ZXV5 915 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 IQCA1Q86XH1 822 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 CHP1Q99653 195 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 SLF1Q9BQI6 1058 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 TRIM10Q9UDY6 481 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 CDC23Q9UJX2 597 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 JAG2Q9Y219 1238 aa10.56□□□□□ -0.72
HLA-DOA-201ENST00000229829 CNTNAP5Q8WYK1 1306 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 MYH14Q7Z406 1995 aaKnown RBP10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 TRIM49BA6NDI0 452 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 ITPK1Q13572 414 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 KIRREL3Q8IZU9 778 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 RASGRP4Q8TDF6 673 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 EEF2KMTQ96G04 330 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 MYH13Q9UKX3 1938 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 CORO7P57737 925 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 RNF187Q5TA31 235 aaPredicted RBP10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 LRCH2Q5VUJ6 765 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 CTAGE1Q96RT6 745 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 ABHD10Q9NUJ1 306 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 CAPN7Q9Y6W3 813 aa10.55□□□□□ -0.72
HLA-DOA-201ENST00000229829 EBAG9O00559 213 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 ATP8B1O43520 1251 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 COPB1P53618 953 aaKnown RBP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 NLRP5P59047 1200 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 PLIN2Q99541 437 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 NAA15Q9BXJ9 866 aaKnown RBP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 ZNF804BA4D1E1 1349 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 PP2D1A8MPX8 630 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 USP8P40818 1118 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 ARHGAP25P42331 645 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 MMP14P50281 582 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 CACNA1SQ13698 1873 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 CNGA4Q8IV77 575 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 IQUBQ8NA54 791 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 AFAP1L1Q8TED9 768 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 NELFBQ8WX92 580 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 FAM84BQ96KN1 310 aaPredicted RBP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 RBBP6Q7Z6E9 1792 aaKnown RBP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 CCDC151A5D8V7 595 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 ATP2C2O75185 946 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 KRT9P35527 623 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 PRCPP42785 496 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 PMS1P54277 932 aaKnown RBP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 BIRC2Q13490 618 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 LIMA1Q9UHB6 759 aaKnown RBP10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 FAM205AQ6ZU69 1335 aa10.54□□□□□ -0.72
HLA-DOA-201ENST00000229829 LRRC10BA6NIK2 292 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 KCNJ18B7U540 433 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 RNF40O75150 1001 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 KIAA0754O94854 1291 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 INPP5BP32019 993 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 PAK1Q13153 545 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 KCNJ12Q14500 433 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 TCP11X2Q5H9J9 407 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 BEND6Q5SZJ8 279 aaPredicted RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 NCAPH2Q6IBW4 605 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 IRF2BP1Q8IU81 584 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 NOA1Q8NC60 698 aaKnown RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 RBM28Q9NW13 759 aaKnown RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 MKRN1Q9UHC7 482 aaKnown RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 CTAGE9A4FU28 777 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 MAP2K7O14733 419 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 SCG2P13521 617 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 KCNQ4P56696 695 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 CASP8Q14790 479 aa10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
HLA-DOA-201ENST00000229829 CELF1Q92879 486 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms