RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 CYTH3O43739 400 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 PDIA3P30101 505 aaKnown RBP23.02■■□□□ 1.28
HOXA6-201ENST00000222728 CDC27P30260 824 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 STAT3P40763 770 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 PSMC4P43686 418 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 CCT2P78371 535 aaKnown RBP23.02■■□□□ 1.28
HOXA6-201ENST00000222728 STK3Q13188 491 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 KIF22Q14807 665 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 SNRNP48Q6IEG0 339 aaKnown RBP23.02■■□□□ 1.28
HOXA6-201ENST00000222728 CCDC82Q8N4S0 544 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 SRBD1Q8N5C6 995 aaKnown RBP23.02■■□□□ 1.28
HOXA6-201ENST00000222728 TRIM47Q96LD4 638 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 AGBL1Q96MI9 1066 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 FAM217BQ9NTX9 383 aaPredicted RBP23.02■■□□□ 1.28
HOXA6-201ENST00000222728 TPCN1Q9ULQ1 816 aa23.02■■□□□ 1.28
HOXA6-201ENST00000222728 FMNL1O95466 1100 aaPredicted RBP23.01■■□□□ 1.27
HOXA6-201ENST00000222728 FDX1P10109 184 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 EVCP57679 992 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 CCNA1P78396 465 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 RABEP1Q15276 862 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 CDC37Q16543 378 aaPredicted RBP23.01■■□□□ 1.27
HOXA6-201ENST00000222728 TMTC3Q6ZXV5 915 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 NCAPG2Q86XI2 1143 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 HOMER1Q86YM7 354 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 CCAR1Q8IX12 1150 aaKnown RBP23.01■■□□□ 1.27
HOXA6-201ENST00000222728 TEX13BQ9BXU2 312 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 RIPK3Q9Y572 518 aa23.01■■□□□ 1.27
HOXA6-201ENST00000222728 LCTP09848 1927 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 MCM3APO60318 1980 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 ERCC3P19447 782 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 GNAQP50148 359 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 FCGRTP55899 365 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 ANKRD1Q15327 319 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 QRICH1Q2TAL8 776 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 RIOX2Q8IUF8 465 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 RIOX1Q9H6W3 641 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 NCOA5Q9HCD5 579 aaKnown RBP23■■□□□ 1.27
HOXA6-201ENST00000222728 HOMER2Q9NSB8 354 aa23■■□□□ 1.27
HOXA6-201ENST00000222728 RBM28Q9NW13 759 aaKnown RBP23■■□□□ 1.27
HOXA6-201ENST00000222728 TNPO2O14787 897 aaKnown RBP22.99■■□□□ 1.27
HOXA6-201ENST00000222728 ATP2A1O14983 1001 aa22.99■■□□□ 1.27
HOXA6-201ENST00000222728 LARGE1O95461 756 aa22.99■■□□□ 1.27
HOXA6-201ENST00000222728 ADD1P35611 737 aaKnown RBP22.99■■□□□ 1.27
HOXA6-201ENST00000222728 RCAN1P53805 252 aa22.99■■□□□ 1.27
HOXA6-201ENST00000222728 ZNF274Q96GC6 653 aaPredicted RBP22.99■■□□□ 1.27
HOXA6-201ENST00000222728 PIGSQ96S52 555 aa22.99■■□□□ 1.27
HOXA6-201ENST00000222728 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
HOXA6-201ENST00000222728 CCPG1Q9ULG6 757 aa22.99■■□□□ 1.27
HOXA6-201ENST00000222728 NID2Q14112 1375 aa22.99■■□□□ 1.27
HOXA6-201ENST00000222728 hCG_1642624A0A1W2PR95 340 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 ICAM1P05362 532 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 ALAS1P13196 640 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 MAPK4P31152 587 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 OAZ1P54368 228 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 USH1GQ495M9 461 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 GPR142Q7Z601 462 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 LZTS2Q9BRK4 669 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 SPZ1Q9BXG8 430 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 PRDM10Q9NQV6 1147 aa22.98■■□□□ 1.27
HOXA6-201ENST00000222728 OTOP1Q7RTM1 612 aa22.97■■□□□ 1.27
HOXA6-201ENST00000222728 SHCBP1Q8NEM2 672 aa22.97■■□□□ 1.27
HOXA6-201ENST00000222728 MTMR8Q96EF0 704 aa22.97■■□□□ 1.27
HOXA6-201ENST00000222728 TRIM17Q9Y577 477 aa22.97■■□□□ 1.27
HOXA6-201ENST00000222728 CNTNAP5Q8WYK1 1306 aa22.97■■□□□ 1.27
HOXA6-201ENST00000222728 ZNF236Q9UL36 1845 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 PPP1R11O60927 126 aaPredicted RBP22.96■■□□□ 1.27
HOXA6-201ENST00000222728 PPFIA3O75145 1194 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 SLC25A27O95847 323 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 ME3Q16798 604 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 PLEKHH3Q7Z736 793 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
HOXA6-201ENST00000222728 MROH8Q9H579 483 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 RNF146Q9NTX7 359 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 GABRQQ9UN88 632 aa22.96■■□□□ 1.27
HOXA6-201ENST00000222728 ZBTB5O15062 677 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 SMARCA1P28370 1054 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 FUT2Q10981 343 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 SCRN1Q12765 414 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 MUM1L1Q5H9M0 696 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 FBXO11Q86XK2 927 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 NECAB1Q8N987 351 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 COA7Q96BR5 231 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 RRP36Q96EU6 259 aaKnown RBP22.95■■□□□ 1.26
HOXA6-201ENST00000222728 TRERF1Q96PN7 1200 aa22.95■■□□□ 1.26
HOXA6-201ENST00000222728 CCDC196A0A1B0GTZ2 297 aa22.94■■□□□ 1.26
HOXA6-201ENST00000222728 PFKFB2O60825 505 aa22.94■■□□□ 1.26
HOXA6-201ENST00000222728 DTNBO60941 627 aa22.94■■□□□ 1.26
HOXA6-201ENST00000222728 CD2BP2O95400 341 aaKnown RBP22.94■■□□□ 1.26
HOXA6-201ENST00000222728 PRKCZQ05513 592 aa22.94■■□□□ 1.26
HOXA6-201ENST00000222728 PNMA6FA0A0J9YX94 578 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 ST18O60284 1047 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 PTPREP23469 700 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 COPB2P35606 906 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 PPP2R5BQ15173 497 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 CTU1Q7Z7A3 348 aaKnown RBP22.93■■□□□ 1.26
HOXA6-201ENST00000222728 PHKBQ93100 1093 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 MMP19Q99542 508 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 SEC63Q9UGP8 760 aaKnown RBP22.93■■□□□ 1.26
HOXA6-201ENST00000222728 SRRDQ9UH36 339 aa22.93■■□□□ 1.26
HOXA6-201ENST00000222728 LIMCH1Q9UPQ0 1083 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms