RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 ADCY7P51828 1080 aa17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 NONOQ15233 471 aaKnown RBP eCLIP17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 CDC37Q16543 378 aaPredicted RBP17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 QRICH1Q2TAL8 776 aa17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 ANO6Q4KMQ2 910 aa17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 GPC2Q8N158 579 aa17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 PPP1R9BQ96SB3 815 aa17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 NUP88Q99567 741 aaPredicted RBP17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 SCAF8Q9UPN6 1271 aaKnown RBP17.8■□□□□ 0.44
LAPTM4A-201ENST00000175091 PHF20L1A8MW92 1017 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 ASNSP08243 561 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 STX1AQ16623 288 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 ARL6IP4Q66PJ3 421 aaKnown RBP17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 BTNL9Q6UXG8 535 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 C4orf32Q8N8J7 132 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 ACER1Q8TDN7 264 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 GPRC5DQ9NZD1 345 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 KIAA1468Q9P260 1216 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 MYH7BA7E2Y1 1941 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 CAVIN2O95810 425 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 KRBA2Q6ZNG9 492 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 GOPCQ9HD26 462 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 RIC8AQ9NPQ8 531 aa17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
LAPTM4A-201ENST00000175091 H7C1D1 291 aa17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 CLK2P49760 499 aaKnown RBP17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 SYDE2Q5VT97 1194 aa17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 USP49Q70CQ1 688 aa17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 ELOA2Q8IYF1 753 aaPredicted RBP17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 ERCC4Q92889 916 aaPredicted RBP17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 DNAJC25Q9H1X3 360 aa17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
LAPTM4A-201ENST00000175091 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 TMEM232C9JQI7 657 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 ORC2Q13416 577 aaPredicted RBP17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 KIAA1755Q5JYT7 1200 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 NEK8Q86SG6 692 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 TRPM4Q8TD43 1214 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 SYMPKQ92797 1274 aaKnown RBP17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 CUL5Q93034 780 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 SYT17Q9BSW7 474 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 DEFB129Q9H1M3 183 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 VCPKMTQ9H867 229 aa17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 BIN2Q9UBW5 565 aaPredicted RBP17.77■□□□□ 0.44
LAPTM4A-201ENST00000175091 LAD1O00515 517 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 IL17AQ16552 155 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 APOBEC3FQ8IUX4 373 aaKnown RBP17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 TBCKQ8TEA7 893 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 CBX8Q9HC52 389 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 POLR2DO15514 142 aaKnown RBP17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 ACTN4O43707 911 aaKnown RBP17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 STAT2P52630 851 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 C11orf57Q6ZUT1 292 aaPredicted RBP17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 CNNM3Q8NE01 707 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 EPSTI1Q96J88 318 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 GINM1Q9NU53 330 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 TUBE1Q9UJT0 475 aa17.76■□□□□ 0.43
LAPTM4A-201ENST00000175091 PRPHP41219 470 aa17.75■□□□□ 0.43
LAPTM4A-201ENST00000175091 ZNF165P49910 485 aa17.75■□□□□ 0.43
LAPTM4A-201ENST00000175091 ANGEL2Q5VTE6 544 aaKnown RBP17.75■□□□□ 0.43
LAPTM4A-201ENST00000175091 GLIS2Q9BZE0 524 aaPredicted RBP17.75■□□□□ 0.43
LAPTM4A-201ENST00000175091 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
LAPTM4A-201ENST00000175091 TMEM60Q9H2L4 133 aa17.75■□□□□ 0.43
LAPTM4A-201ENST00000175091 PHIPQ8WWQ0 1821 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 A0A087X0B3 334 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 LONP1P36776 959 aaKnown RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 MRPL12P52815 198 aaKnown RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 IKQ13123 557 aaPredicted RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 UBE2SQ16763 222 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 LETM2Q2VYF4 491 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 FAM83BQ5T0W9 1011 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 AMNQ9BXJ7 453 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PCDHA1Q9Y5I3 950 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 SSC5DA1L4H1 1573 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PARP14Q460N5 1801 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PAPPA2Q9BXP8 1791 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 NEMFO60524 1076 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 CCNT1O60563 726 aaKnown RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PLA2G6O60733 806 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PNOCQ13519 176 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 CCDC84Q86UT8 332 aaPredicted RBP17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 PSTPIP2Q9H939 334 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 GGA3Q9NZ52 723 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 USP25Q9UHP3 1055 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
LAPTM4A-201ENST00000175091 A0A087WWV3 80 aa17.73■□□□□ 0.43
LAPTM4A-201ENST00000175091 CTNND1O60716 968 aaKnown RBP17.73■□□□□ 0.43
LAPTM4A-201ENST00000175091 YBX3P16989 372 aaKnown RBP eCLIP17.73■□□□□ 0.432e-10■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms