RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 SPRED3Q2MJR0 410 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 CCNI2Q6ZMN8 369 aaPredicted RBP6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 SMIM5Q71RC9 77 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 TNFRSF25Q93038 417 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 UBAC1Q9BSL1 405 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 TMEM60Q9H2L4 133 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 NHEJ1Q9H9Q4 299 aaPredicted RBP6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 LRRC4CQ9HCJ2 640 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 USP21Q9UK80 565 aa6.54□□□□□ -1.36
CEACAM1-201ENST00000161559 ABCC12Q96J65 1359 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 PSMD14O00487 310 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 BUB1O43683 1085 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ECM2O94769 699 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 SEC24CP53992 1094 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 CREG2Q8IUH2 290 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 GLIS3Q8NEA6 775 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ZNF384Q8TF68 577 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 GSDMAQ96QA5 445 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 COL18A1P39060 1754 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 LRRC10BA6NIK2 292 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 GUCY2CP25092 1073 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 OR8K1Q8NGG5 319 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ZNF507Q8TCN5 953 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 STAG1Q8WVM7 1258 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 PCMTD1Q96MG8 357 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 CRACR2AQ9BSW2 395 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 GOLPH3Q9H4A6 298 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 MED4Q9NPJ6 270 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 FAM207AQ9NSI2 230 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 LUC7L2Q9Y383 392 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 PARP4Q9UKK3 1724 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ITIH6Q6UXX5 1313 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ANKRD18BA2A2Z9 1011 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 TRIM21P19474 475 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ARID4AP29374 1257 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 HNRNPH1P31943 449 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 GYG1P46976 350 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 GUCY2FP51841 1108 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 FAM76AQ8TAV0 307 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ZCRB1Q8TBF4 217 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 PPM1EQ8WY54 764 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 CTAGE1Q96RT6 745 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 CD248Q9HCU0 757 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 LRP2BPQ9P2M1 347 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 RWDD2AQ9UIY3 292 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ZBTB1Q9Y2K1 713 aa6.53□□□□□ -1.36
CEACAM1-201ENST00000161559 ERICH2A1L162 156 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 POTEB2H3BUK9 544 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 ERLIN2O94905 339 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 KLRK1P26718 216 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 TROAPQ12815 778 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC96Q2M329 555 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 PAPD7Q5XG87 772 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 GOLGA6L1Q8N7Z2 621 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 AENQ8WTP8 325 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 TRIM47Q96LD4 638 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 DNAJC7Q99615 494 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 DUSP9Q99956 384 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 RBM12Q9NTZ6 932 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 UBR2Q8IWV8 1755 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 SHOX2O60902 331 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 GLI1P08151 1106 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 CYP7A1P22680 504 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 CARSP49589 748 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 STK4Q13043 487 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 ANKRD40Q6AI12 368 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 KANK3Q6NY19 840 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 ANKRD18AQ8IVF6 992 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 ELOA2Q8IYF1 753 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 STAG2Q8N3U4 1231 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 OR2W6PQ8NHA6 318 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 PIGBQ92521 554 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 CAPS2Q9BXY5 557 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 TTYH3Q9C0H2 523 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 MKRN1Q9UHC7 482 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 C1orf167Q5SNV9 1468 aa6.52□□□□□ -1.37
CEACAM1-201ENST00000161559 LGALS16A8MUM7 142 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 KLRC4O43908 158 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 FGFR2P21802 821 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 STAT6P42226 847 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 GFPT1Q06210 699 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 IFIT1BQ5T764 474 aaKnown RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 ZNF658Q5TYW1 1059 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 C2CD5Q86YS7 1000 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 ADSSL1Q8N142 457 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 WASF1Q92558 559 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 GJA10Q969M2 543 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 ZIM3Q96PE6 472 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 TUBGCP2Q9BSJ2 902 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 KRT23Q9C075 422 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 CEP131Q9UPN4 1083 aa6.51□□□□□ -1.37
CEACAM1-201ENST00000161559 CAPN7Q9Y6W3 813 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms