RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 PDE11AQ9HCR9 933 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 ABCB6Q9NP58 842 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 FRMPD2Q68DX3 1309 aaPredicted RBP9.31□□□□□ -0.92
CDC27-201ENST00000066544 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 CTAGE15A4D2H0 777 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CTAGE8P0CG41 777 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 LONP1P36776 959 aaKnown RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 CCDC122Q5T0U0 273 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CTAGE6Q86UF2 777 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CTAGE4Q8IX94 777 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 C4orf32Q8N8J7 132 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CDCA7Q9BWT1 371 aaPredicted RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 NAA15Q9BXJ9 866 aaKnown RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 MACROD2A1Z1Q3 448 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 FGRP09769 529 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 ARHGAP25P42331 645 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 TRAPPC10P48553 1259 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 VSNL1P62760 191 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 TBC1D8BQ0IIM8 1120 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 STK4Q13043 487 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 PICALMQ13492 652 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 STIM1Q13586 685 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CABP7Q86V35 215 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 OR8K1Q8NGG5 319 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 PSMB7Q99436 277 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 ANKRD2Q9GZV1 360 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 SLC39A2Q9NP94 309 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 TCP11L1Q9NUJ3 509 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 MAD2L2Q9UI95 211 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 TTF2Q9UNY4 1162 aaKnown RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 DOT1LQ8TEK3 1739 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 ABCA3Q99758 1704 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 DUOX1Q9NRD9 1551 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 H3BQF6 201 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 N4BP1O75113 896 aaKnown RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 NDUFA10O95299 355 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 LMAN1P49257 510 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 ADSSL1Q8N142 457 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 ANKZF1Q9H8Y5 726 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 SMCO2A6NFE2 343 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 GJA10Q969M2 543 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 CCNL1Q9UK58 526 aaPredicted RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 REXO2Q9Y3B8 237 aaKnown RBP9.3□□□□□ -0.92
CDC27-201ENST00000066544 DUSP10Q9Y6W6 482 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 LRP5O75197 1615 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 SSBP05455 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC27-201ENST00000066544 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 TEX11Q8IYF3 940 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 MB21D1Q8N884 522 aa9.3□□□□□ -0.92
CDC27-201ENST00000066544 PCP11498 1178 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 SOGA3Q5TF21 947 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 KRT26Q7Z3Y9 468 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 DGKHQ86XP1 1220 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 CEP112Q8N8E3 955 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 ARHGEF1Q92888 912 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 COA7Q96BR5 231 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 PIGSQ96S52 555 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 EYA3Q99504 573 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 TUBGCP2Q9BSJ2 902 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 VPS18Q9P253 973 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 H7C1D1 291 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 BAG3O95817 575 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 DNA2P51530 1060 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 FKBP15Q5T1M5 1219 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 EXOC1Q9NV70 894 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 NARFQ9UHQ1 456 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 TIAM2Q8IVF5 1701 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 SEMA3EO15041 775 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 BTDP43251 543 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 TNNT3P45378 269 aaPredicted RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 SPTY2D1Q68D10 685 aaPredicted RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 NYXQ9GZU5 481 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 LACRTQ9GZZ8 138 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 CACNA1SQ13698 1873 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 STXBP3O00186 592 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 HNRNPH2P55795 449 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 MAPK8IP2Q13387 824 aaPredicted RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 ARL6IP4Q66PJ3 421 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 CCDC148Q8NFR7 591 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 CAGE1Q8TC20 777 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 FAM207AQ9NSI2 230 aaPredicted RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 CCDC66A2RUB6 948 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 UFL1O94874 794 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 RASA1P20936 1047 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 RFC4P35249 363 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 GRM4Q14833 912 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 SBK1Q52WX2 424 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 ANKRD40Q6AI12 368 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 ANKRD13CQ8N6S4 541 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 TBCKQ8TEA7 893 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 SMCR8Q8TEV9 937 aaPredicted RBP9.29□□□□□ -0.92
CDC27-201ENST00000066544 CCDC51Q96ER9 411 aa9.29□□□□□ -0.92
CDC27-201ENST00000066544 MYO6Q9UM54 1294 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms