RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 ZBED4O75132 1171 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.53
CD9-201ENST00000009180 KIF5BP33176 963 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
CD9-201ENST00000009180 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.53
CD9-201ENST00000009180 ERVK-9P63128 1117 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 ERVK-24P63145 666 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 PLS1Q14651 629 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 CDC37Q16543 378 aaPredicted RBP11.71□□□□□ -0.53
CD9-201ENST00000009180 ME3Q16798 604 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 FAM110CQ1W6H9 321 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 Q3C1V9 767 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 HOMER1Q86YM7 354 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 CPXCR1Q8N123 301 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 PIGSQ96S52 555 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 MAP3K14Q99558 947 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 ARHGAP39Q9C0H5 1083 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 PORCNQ9H237 461 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 RANBP17Q9H2T7 1088 aaKnown RBP11.71□□□□□ -0.53
CD9-201ENST00000009180 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 MORF4L1Q9UBU8 362 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 ZNF214Q9UL59 606 aaPredicted RBP11.71□□□□□ -0.53
CD9-201ENST00000009180 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
CD9-201ENST00000009180 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.54
CD9-201ENST00000009180 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 ST18O60284 1047 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 PPP1R11O60927 126 aaPredicted RBP11.7□□□□□ -0.54
CD9-201ENST00000009180 CTGFP29279 349 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 RCAN1P53805 252 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 FUT2Q10981 343 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
CD9-201ENST00000009180 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
CD9-201ENST00000009180 ZNF274Q96GC6 653 aaPredicted RBP11.7□□□□□ -0.54
CD9-201ENST00000009180 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
CD9-201ENST00000009180 SPATC1LQ9H0A9 340 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
CD9-201ENST00000009180 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
CD9-201ENST00000009180 PFKFB2O60825 505 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 GNAQP50148 359 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 SP3Q02447 781 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 SCRN1Q12765 414 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 QRICH1Q2TAL8 776 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 USH1GQ495M9 461 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 MB21D1Q8N884 522 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 GPRC5AQ8NFJ5 357 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 GTF3C2Q8WUA4 911 aaPredicted RBP11.69□□□□□ -0.54
CD9-201ENST00000009180 PHKBQ93100 1093 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 SPZ1Q9BXG8 430 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 SLKQ9H2G2 1235 aaPredicted RBP11.69□□□□□ -0.54
CD9-201ENST00000009180 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 HOMER2Q9NSB8 354 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 RBM28Q9NW13 759 aaKnown RBP11.69□□□□□ -0.54
CD9-201ENST00000009180 CCPG1Q9ULG6 757 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 LIMCH1Q9UPQ0 1083 aa11.69□□□□□ -0.54
CD9-201ENST00000009180 STAT3P40763 770 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 LBX1P52954 281 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 LACTBP83111 547 aaPredicted RBP11.68□□□□□ -0.54
CD9-201ENST00000009180 NTRK3Q16288 839 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 NCAPG2Q86XI2 1143 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 LZTS2Q9BRK4 669 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
CD9-201ENST00000009180 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 ZBTB5O15062 677 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 FKTNO75072 461 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 CTDNEP1O95476 244 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 ICAM1P05362 532 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 ALAS1P13196 640 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 ERCC3P19447 782 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 CTCFP49711 727 aaPredicted RBP11.67□□□□□ -0.54
CD9-201ENST00000009180 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 RIOX2Q8IUF8 465 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 GPKOWQ92917 476 aaPredicted RBP eCLIP11.67□□□□□ -0.54
CD9-201ENST00000009180 RRP36Q96EU6 259 aaKnown RBP11.67□□□□□ -0.54
CD9-201ENST00000009180 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
CD9-201ENST00000009180 CCDC196A0A1B0GTZ2 297 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 CPLX1O14810 134 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 ATP2A1O14983 1001 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 JAK2O60674 1132 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 FDX1P10109 184 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 IFNAR1P17181 557 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 PSMC4P43686 418 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 CCNA1P78396 465 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 NBR1Q14596 966 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 GPR142Q7Z601 462 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 FBXO11Q86XK2 927 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 CCAR1Q8IX12 1150 aaKnown RBP11.66□□□□□ -0.54
CD9-201ENST00000009180 COA7Q96BR5 231 aa11.66□□□□□ -0.54
CD9-201ENST00000009180 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms