RNA–Protein interactions for RNA: ENSMUST00000211005.1

Nup98-204, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 3,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-204ENSMUST00000211005 Ttll12Q3UDE2 639 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Adgre1Q61549 931 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Hexim1Q8R409 356 aaKnown RBP10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 BaatQ91X34 420 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Arhgef25Q9CWR0 618 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Wdr33Q8K4P0 1330 aaKnown RBP10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Mms22lB1AUR6 1238 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Arhgef16Q3U5C8 713 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Slc10a4Q3UEZ8 437 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Brd2Q7JJ13 798 aaKnown RBP10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Cep85Q8BMK0 761 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Hnrnpul1Q8VDM6 859 aaKnown RBP10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Krt23Q99PS0 422 aa10.77□□□□□ -0.69
Nup98-204ENSMUST00000211005 Tpd52l1O54818 204 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dnajb6O54946 365 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Meis2P97367 477 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Tfcp2l1Q3UNW5 479 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Pls1Q3V0K9 630 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Senp5Q6NXL6 749 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Csrnp2Q8BGQ2 534 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Nr3c2Q8VII8 978 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Mrpl11Q9CQF0 192 aaKnown RBP10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Iqca1Q9CUL5 857 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 PdcQ9QW08 244 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Pdcd6ipQ9WU78 869 aaKnown RBP10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Mtmr9Q9Z2D0 545 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Usp49Q6P9L4 685 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Lrrd1Q8C0R9 853 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Gm10134F6ZQC6 126 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Jakmip3Q5DTN8 844 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Cdca8Q8BHX3 289 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Sap130Q8BIH0 1057 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Lca5lQ8C0X0 741 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Trim29Q8R2Q0 587 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 AdpgkQ8VDL4 496 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Pcdhb15Q91Y04 786 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Vps16Q920Q4 839 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 PdgfdQ925I7 370 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Usp14Q9JMA1 493 aaKnown RBP10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Sbf2E9PXF8 1872 aa10.76□□□□□ -0.69
Nup98-204ENSMUST00000211005 Slc39a2G3X943 309 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 AoahO35298 574 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Cnnm4Q69ZF7 771 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Churc1Q6DG52 112 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ift122Q6NWV3 1182 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Tulp1Q9Z273 543 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Flot1O08917 428 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 CatspereP0DP43 985 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Traf1P39428 409 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Prpf4bQ61136 1007 aaKnown RBP10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Fbxo10Q7TQF2 950 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Hs2st1Q8R3H7 356 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ppp2r5dQ91V89 594 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Atp5c1Q91VR2 298 aaKnown RBP10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Bhmt2Q91WS4 363 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Calml3Q9D6P8 149 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 TnmdQ9EP64 317 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Skint3A7TZF0 458 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Gm44503E9PYU5 387 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Rad51bO35719 350 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Hoxa11P31311 313 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Nr5a1P33242 462 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dnaaf4Q8R368 420 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ces1Q8VCC2 565 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Sh3bgrQ9WUZ7 214 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 S1pr4Q9Z0L1 386 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Col11a1Q61245 1804 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Mctp1E9PV86 951 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Rasa3Q60790 834 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dync1li2Q6PDL0 492 aaKnown RBP10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ccdc172Q810N9 267 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ireb2Q811J3 963 aaKnown RBP10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Zfp202Q8C879 641 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Cmtm5Q9D6G9 156 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dusp10Q9ESS0 483 aa10.75□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ppp1r9aH3BJD6 1292 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dapk3O54784 448 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Pla2g4eQ50L42 875 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Hoxa13Q62424 386 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Pgrmc2Q80UU9 217 aaKnown RBP10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dcaf8Q8N7N5 591 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Slc4a9E9PUP3 929 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Gm15448F6PZL4 682 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ddx49Q4FZF3 480 aaKnown RBP10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Olfr119Q7TRJ5 321 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ctdspl2Q8BG15 465 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ccdc150Q8CDI7 1110 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Sulf1Q8K007 870 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Fez1Q8K0X8 392 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Gm5134E9QAB5 671 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Epb41l2O70318 988 aaKnown RBP10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Kifap3P70188 793 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Arl14Q3SXC5 192 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Hook1Q8BIL5 728 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Kcnh3Q9WVJ0 1095 aa10.74□□□□□ -0.69
Nup98-204ENSMUST00000211005 Ttc6G3UYY4 1857 aa10.73□□□□□ -0.69
Nup98-204ENSMUST00000211005 C87977A2A958 498 aa10.73□□□□□ -0.69
Nup98-204ENSMUST00000211005 Gm21969J3QJZ1 289 aa10.73□□□□□ -0.69
Nup98-204ENSMUST00000211005 Rnf216P58283 853 aa10.73□□□□□ -0.69
Nup98-204ENSMUST00000211005 Dcaf15Q6PFH3 600 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms