RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Ildr1Q8CBR1 537 aa12.04□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Apobec3Q99J72 440 aaKnown RBP12.04□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Saal1Q9D2C2 474 aa12.04□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Ssc5dQ8BV57 1371 aa12.04□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Tex13cD3YU32 604 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Opa1P58281 960 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Slc9a2Q3ZAS0 814 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 PnocQ64387 187 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Fnbp1Q80TY0 616 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 BlmhQ8R016 455 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 ZgpatQ8VDM1 511 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Bpifb4A2BGH0 617 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Nck2O55033 380 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Rnf187Q8BFX1 236 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Eif3hQ91WK2 352 aaKnown RBP12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 GzmnQ920S1 248 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Wdr64Q9D565 1086 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Arl6ip4Q9JM93 229 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Akap11E9Q777 1895 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 VirmaA2AIV2 1811 aaKnown RBP12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Brwd3A2AHJ4 1799 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Izumo3A6PWV3 263 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Gm1993A6X8I0 212 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 SlxD3Z347 212 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Asic3Q6X1Y6 530 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Rassf10Q8BL43 508 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 3830417A13RikQ8BQJ2 303 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 RadxQ8C779 850 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Ubxn1Q922Y1 297 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Ttc14Q9CSP9 761 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Mtfr1lQ9CWE0 289 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Eef1gQ9D8N0 437 aaKnown RBP12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Pkd2l2Q9JLG4 621 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Klra17Q9JMA4 273 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 CenphQ9QYM8 241 aa12.03□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Hnrnph3D3Z3N4 346 aaKnown RBP12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Gucy1a2F8VQK3 730 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Rnaseh1O70338 285 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 RaraP11416 462 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 PpardP35396 440 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Cep131Q62036 1060 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Snip1Q8BIZ6 383 aaKnown RBP12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Cep95Q8BVV7 827 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 ApobrQ8VBT6 942 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 Tmem143Q8VD26 458 aa12.02□□□□□ -0.48
Rnf40-206ENSMUST00000206914 PodnQ7TQ62 611 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Q8BWG4 1187 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Plagl2Q925T4 496 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Mis12Q9CY25 206 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 JcadQ5DTX6 1320 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Krt78E9Q0F0 1068 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 GabrdP22933 449 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Nr5a1P33242 462 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Mars2Q499X9 586 aaKnown RBP12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Cnnm4Q69ZF7 771 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Gpbp1Q6NXH3 473 aaKnown RBP12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Fbxo18Q8K2I9 1042 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ebag9Q9D0V7 213 aa12.02□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Etnk2A7MCT6 385 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Vmn2r71L7N2D8 855 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Nr1i2O54915 431 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ap1g2O88512 791 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 MybP06876 636 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Slx1bQ8BX32 270 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Gimap7Q8R379 293 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ndufab1Q9CR21 156 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Cmtr1Q9DBC3 837 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Gpaa1Q9WTK3 621 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 4931408C20RikE9PWP9 1381 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Trim43aQ3TL54 445 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ift20Q61025 132 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 HelbQ6NVF4 1074 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Stn1Q8K2X3 378 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ddx23D3Z0M9 819 aaKnown RBP12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Stat5bP42232 786 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Gfpt1P47856 697 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ssrp1Q08943 708 aaKnown RBP12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Spata5Q3UMC0 893 aaKnown RBP12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Slc9a1Q61165 820 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Fkbp3Q62446 224 aaKnown RBP12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Krt40Q6IFX3 439 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Mettl25Q6NXH8 597 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Gga2Q6P5E6 603 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Tmem60Q8K174 133 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Lrrc59Q922Q8 307 aaKnown RBP12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 MymkQ9D1N4 221 aa12.01□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ankrd35E9Q9D8 996 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 CltaO08585 235 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Zfpm1O35615 995 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Hnrnph1O35737 449 aaKnown RBP12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 HmmrQ00547 794 aaKnown RBP12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ezh2Q61188 746 aaKnown RBP12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Secisbp2lQ6A098 1086 aaKnown RBP12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Antxr2Q6DFX2 487 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ccp110Q7TSH4 1004 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Znrd1-asQ8R0E5 213 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Smtnl1Q99LM3 459 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Ercc4Q9QZD4 917 aa12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Hnrnph2P70333 449 aaKnown RBP12□□□□□ -0.49
Rnf40-206ENSMUST00000206914 Cep70Q6IQY5 616 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms