RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Kcnj14Q8JZN3 434 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Q8K2W9 541 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Slc18a1Q8R090 521 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Rbm19Q8R3C6 952 aaKnown RBP14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Ces3bQ8VCU1 571 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Fubp1Q91WJ8 651 aaKnown RBP14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Cyp2c50Q91X77 490 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Traf7Q922B6 594 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Usp14Q9JMA1 493 aaKnown RBP14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Psmd10Q9Z2X2 231 aa14.21□□□□□ -0.13
Trim50-202ENSMUST00000111180 Trim5E9PV98 497 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 ImpactO55091 318 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Mx1P09922 631 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Sap30bpQ02614 308 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gcnt1Q09324 428 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 YdjcQ14BV6 310 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Srrm1Q52KI8 946 aaKnown RBP14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Eme2Q56A04 373 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Kctd1Q5M956 257 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Stxbp3Q60770 592 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Fndc3bQ6NWW9 1207 aaKnown RBP14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ms4a5Q810P8 197 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Plekha4Q8VC98 588 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Spint1Q9R097 507 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 Homer1Q9Z2Y3 366 aa14.2□□□□□ -0.14
Trim50-202ENSMUST00000111180 MthfslL7N466 203 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ampd3O08739 766 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 MyocO70624 490 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Traf1P39428 409 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Lilrb3P97484 841 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 PRAG1Q571I4 1179 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Tcp11l1Q8BTG3 509 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Bri3bpQ8BXV2 253 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Zbtb9Q8CDC7 459 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Tdrd1Q99MV1 1172 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Mettl16Q9CQG2 553 aaKnown RBP14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 TbcbQ9D1E6 244 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 DcpsQ9DAR7 338 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Tfcp2Q9ERA0 502 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Prkab1Q9R078 270 aa14.19□□□□□ -0.14
Trim50-202ENSMUST00000111180 Mboat4P0C7A3 435 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Btg1-ps1Q3V0S2 161 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Btg1-ps2Q3V0X0 161 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Pla2g4eQ50L42 875 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Rgl2Q61193 778 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Clca4aQ6Q473 924 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Znf784Q8BI69 297 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gjc2Q8BQU6 440 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Nup88Q8CEC0 753 aaKnown RBP14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Dppa3Q8QZY3 150 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Bst2Q8R2Q8 172 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ccer1Q9CQL2 403 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Yeats4Q9CR11 227 aaKnown RBP14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Sel1lQ9Z2G6 790 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Dock2Q8C3J5 1828 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gm42715A0A087WP63 3095 aaKnown RBP14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Tex13cD3YU32 604 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Mars2Q499X9 586 aaKnown RBP14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Cfap52Q5F201 620 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Vmn1r209Q5NC97 312 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Kiaa1211Q5PR69 1207 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Sp4Q62445 782 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 ShbQ6PD21 503 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Dnaaf2Q8BPI1 814 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Nat10Q8K224 1024 aaKnown RBP14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Med4Q9CQA5 270 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Vta1Q9CR26 309 aa14.18□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ktn1Q61595 1327 aaKnown RBP14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ccdc112A0AUP1 442 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Cyp26c1B2RXA7 518 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Copb2O55029 905 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gna11P21278 359 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Fgfr2P21803 821 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gadd45bP22339 160 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 OatP29758 439 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 DSCC1Q14AI0 399 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Fam89aQ14BJ1 175 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gtf3c3Q3TMP1 882 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ttbk2Q3UVR3 1243 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Sfi1Q3UZY0 1216 aaKnown RBP14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Zfp90Q61967 636 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ubap2lQ80X50 1107 aaKnown RBP14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Lrrc15Q80X72 579 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Prkag3Q8BGM7 489 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Nim1kQ8BHI9 436 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Epha10Q8BYG9 1007 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Smc2Q8CG48 1191 aaKnown RBP14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 IrgqQ8VIM9 583 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Stk38Q91VJ4 465 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Bicd2Q921C5 820 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 Etnk1Q9D4V0 363 aa14.17□□□□□ -0.14
Trim50-202ENSMUST00000111180 PatjQ63ZW7 1834 aa14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Ms4a4aA0A087WRT7 236 aa14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Pabpc1lA2A5N3 607 aaKnown RBP14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Phldb3E9QAF4 648 aa14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 LdhbP16125 334 aaKnown RBP14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Cd22P35329 862 aa14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Rnf216P58283 853 aa14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Gdf10P97737 476 aa14.16□□□□□ -0.14
Trim50-202ENSMUST00000111180 Usp28Q5I043 1051 aa14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms