RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Vmn1r188Q8K3N2 308 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Map4k3Q99JP0 894 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Krt85Q9Z2T6 507 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Fndc1E9Q043 1732 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Peg3Q3URU2 1571 aa9.71□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Mthfd2P18155 350 aaKnown RBP9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Sumo1P63166 101 aaKnown RBP9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 CtscP97821 462 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Zic2Q62520 530 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Amigo3Q8C2S7 508 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 GptQ8QZR5 496 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Pard3bQ9CSB4 1203 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 BccipQ9CWI3 316 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Tspan17Q9D7W4 270 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Speer4bQ9D9F7 267 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 PaplnQ9EPX2 1280 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Slc6a14Q9JMA9 638 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Dach1Q9QYB2 751 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Atp11cQ9QZW0 1129 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Mtm1Q9Z2C5 603 aa9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Fam208aQ69ZR9 1610 aaKnown RBP9.71□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm4307E9PZY4 289 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm19402J3QJV4 266 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm7138L7N2C3 230 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Tgfb1P04202 390 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Sod2P09671 222 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Iqsec3Q3TES0 1195 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Lrrn4clQ3TYX2 239 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Ntn5Q3UQ22 452 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Zdhhc8Q5Y5T5 762 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 WaplQ65Z40 1200 aaKnown RBP9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Cacna2d2Q6PHS9 1154 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 AmphQ7TQF7 686 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 L3mbtl3Q8BLB7 883 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Rrp15Q9CYX7 281 aaKnown RBP9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Nt5c3aQ9D020 331 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm3238W4VSP7 230 aa9.7□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Ralgps1A2AR50 585 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Cops5O35864 334 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Obox3Q3UT54 335 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Mars2Q499X9 586 aaKnown RBP9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Pcmtd2Q8BHD8 359 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Hspbap1Q8BK58 483 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Zdhhc3Q8R173 299 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Tmem168Q91VX9 697 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Ifi44lQ9BDB7 447 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Oaz3Q9R109 243 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Mbtps1Q9WTZ2 1052 aa9.69□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Kiaa1551Q5DTW7 1521 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Mug1P28665 1476 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Dhx57Q6P5D3 1388 aaKnown RBP9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm10110D3Z5M2 615 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Kctd17E0CYQ0 296 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Erdr1J3QMM0 206 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm21887J3QQ04 176 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 IapP03975 557 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Klrb1cP27814 223 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 St14P56677 855 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Pcbp3P57722 371 aaKnown RBP9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 PsapQ61207 557 aaKnown RBP9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Cyp2c29Q64458 490 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Krt87Q6IMF0 495 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Pabpc4Q6PHQ9 660 aaKnown RBP9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Teddm1aQ810U2 305 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Tyw1Q8BJM7 721 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Trmt2aQ8BNV1 574 aaKnown RBP9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Tns4Q8BZ33 696 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Unc5dQ8K1S2 956 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Noc3lQ8VI84 807 aaKnown RBP9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Wrnip1Q91XU0 660 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Pde2aQ922S4 916 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Bace2Q9JL18 514 aa9.68□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Rnf17Q99MV7 1640 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Ncoa3O09000 1398 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm10251J3QPM5 127 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Pde9aO70628 534 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 GhrP16882 650 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Atp11aP98197 1187 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 ptchd1Q14B62 888 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Lins1Q3U1D0 764 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 VwceQ3U515 929 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Sema3gQ4LFA9 780 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Oog2Q7TPX8 476 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Trmt61aQ80XC2 290 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 ThemisQ8BGW0 636 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Megf9Q8BH27 600 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm16223Q8CBM3 117 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm2916Q9D9B9 127 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Epb41l3Q9WV92 929 aa9.67□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 CntlnA2AM05 1397 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm2022A0A1Y7VLT7 144 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Magea10A2AMW4 325 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gpr155A2AWR3 868 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Usp51B1AY15 661 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm2075J3QMW5 144 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gm6803J3QPI8 144 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Grap2O89100 322 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 CpoxP36552 443 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Top1Q04750 767 aaKnown RBP9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 BB287469Q3UT53 144 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms