RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Cdk17Q8K0D0 523 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ubxn6Q99PL6 442 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ascc1Q9D8Z1 356 aaKnown RBP16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 FAM186AQ9D9R9 1790 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Cdhr2E9Q7P9 1308 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ttc13A0A1L1SSC7 844 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Prr16A3KMN5 304 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ddx23D3Z0M9 819 aaKnown RBP16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Sec24cG3X972 1096 aaKnown RBP16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Abl1P00520 1123 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Opa1P58281 960 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Kcnb1Q03717 857 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 PcQ05920 1178 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Zfp781Q0P5U5 243 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Nr1d1Q3UV55 615 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Kcna6Q61923 529 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Vps37cQ8R105 352 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Aipl1Q924K1 328 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Etnk2A7MCT6 385 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 MyclP10166 368 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Chrm1P12657 460 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Kdm1aQ6ZQ88 853 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ube3cQ80U95 1083 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Pspc1Q8R326 523 aaKnown RBP16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Sorbs3Q9R1Z8 733 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Stk11Q9WTK7 436 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Plekhd1B2RPU2 505 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Fam186bD3Z420 943 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ddr1Q03146 911 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Cep70Q6IQY5 616 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Naa35Q6PHQ8 725 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Micall1Q8BGT6 870 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 P3h4Q8K2B0 443 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Fbxo18Q8K2I9 1042 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Mylk2Q8VCR8 613 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Synpo2Q91YE8 1087 aaKnown RBP16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Syce1Q9D495 329 aa16.46■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Bcl9Q9D219 1425 aa16.46■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gm28510A0A087WP28 240 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Proca1B0QZF7 307 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Trim34bJ3QNR8 485 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Speer4dL7N216 212 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Carmil2Q3V3V9 1296 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slc9a2Q3ZAS0 814 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Triml1Q8BVP1 470 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gle1Q8R322 699 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Smco2Q9DA21 347 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Pnpla6Q3TRM4 1355 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Calm1P0DP26 149 aaKnown RBP16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Calm2P0DP27 149 aaKnown RBP16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Calm3P0DP28 149 aaKnown RBP16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Trim43aQ3TL54 445 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slc38a10Q5I012 1090 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Cyp7a1Q64505 503 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Mettl25Q6NXH8 597 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Olfr118Q7TRJ6 321 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Vcpip1Q8CDG3 1220 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Fam193aQ8CGI1 1231 aaKnown RBP16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Spata2Q8K004 515 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Dnajc17Q91WT4 303 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Grin3bQ91ZU9 1003 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Bap1Q99PU7 728 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 MymkQ9D1N4 221 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Fam173bQ9D1Z3 247 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Fbxo3Q9DC63 480 aa16.45■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Apol7aB2RT54 418 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Sema3fO88632 785 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Nr5a1P33242 462 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 HmmrQ00547 794 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Traf3ip1Q149C2 625 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Acsbg2Q2XU92 667 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Tmprss11aQ3UQ41 389 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ddx17Q501J6 650 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ift20Q61025 132 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Stn1Q8K2X3 378 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ddx47Q9CWX9 455 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 PigoQ9JJI6 1093 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Myh13B1AR69 1938 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Znf638Q61464 1960 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gm6588E9Q3K0 461 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Hdhd2Q3UGR5 259 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Sec31aQ3UPL0 1230 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Mars2Q499X9 586 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Exoc3Q6KAR6 755 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Zdhhc14Q8BQQ1 489 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ythdf3Q8BYK6 585 aaKnown RBP16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 RadxQ8C779 850 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slain2Q8CI08 581 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Mettl5Q8K1A0 209 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Anapc4Q91W96 807 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Plagl2Q925T4 496 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Cap2Q9CYT6 476 aa16.44■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Smg7Q5RJH6 1138 aaKnown RBP16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Wdr44Q6NVE8 915 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Tsga10Q6NY15 697 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ufl1Q8CCJ3 793 aaKnown RBP16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ushbp1Q8R370 680 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Eif4a3Q91VC3 411 aaKnown RBP16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Smc6Q924W5 1097 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 CactinQ9CS00 772 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms