RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W SGM1P47166 707 aa3.47□□□□□ -1.85
SEC4YFL005W SRB7P47822 140 aa3.47□□□□□ -1.85
SEC4YFL005W DSD1P53095 428 aa3.47□□□□□ -1.85
SEC4YFL005W VPS75P53853 264 aa3.47□□□□□ -1.85
SEC4YFL005W MPS1P54199 764 aa3.47□□□□□ -1.85
SEC4YFL005W MAK10Q02197 733 aa3.47□□□□□ -1.85
SEC4YFL005W YML037CQ03703 340 aa3.47□□□□□ -1.85
SEC4YFL005W ECM22Q05958 814 aaPredicted RBP3.47□□□□□ -1.85
SEC4YFL005W LEU9Q12166 604 aaKnown RBP3.47□□□□□ -1.85
SEC4YFL005W TAH18Q12181 623 aa3.47□□□□□ -1.85
SEC4YFL005W YJR112W-AQ3E743 109 aa3.47□□□□□ -1.85
SEC4YFL005W YAP1P19880 650 aaKnown RBP3.46□□□□□ -1.86
SEC4YFL005W MIA40P36046 403 aa3.46□□□□□ -1.86
SEC4YFL005W MNN2P38069 597 aa3.46□□□□□ -1.86
SEC4YFL005W FAR3P46671 204 aa3.46□□□□□ -1.86
SEC4YFL005W YTP1P53584 459 aa3.46□□□□□ -1.86
SEC4YFL005W YNL144CP53907 740 aa3.46□□□□□ -1.86
SEC4YFL005W EFM6P53970 246 aa3.46□□□□□ -1.86
SEC4YFL005W ZDS2P54786 942 aa3.46□□□□□ -1.86
SEC4YFL005W CAC2Q04199 468 aa3.46□□□□□ -1.86
SEC4YFL005W MFB1Q04922 465 aa3.46□□□□□ -1.86
SEC4YFL005W LUC7Q07508 261 aaPredicted RBP3.46□□□□□ -1.86
SEC4YFL005W YOL159CQ08300 171 aa3.46□□□□□ -1.86
SEC4YFL005W ETT1Q08421 412 aaKnown RBP3.46□□□□□ -1.86
SEC4YFL005W CIR2Q08822 631 aa3.46□□□□□ -1.86
SEC4YFL005W YPT6Q99260 215 aa3.46□□□□□ -1.86
SEC4YFL005W MF(ALPHA)1P01149 165 aa3.45□□□□□ -1.86
SEC4YFL005W CBS1P14066 229 aa3.45□□□□□ -1.86
SEC4YFL005W LCB1P25045 558 aaKnown RBP3.45□□□□□ -1.86
SEC4YFL005W GAC1P28006 793 aa3.45□□□□□ -1.86
SEC4YFL005W SSE2P32590 693 aaKnown RBP3.45□□□□□ -1.86
SEC4YFL005W TSC10P38342 320 aa3.45□□□□□ -1.86
SEC4YFL005W CCT6P39079 546 aa3.45□□□□□ -1.86
SEC4YFL005W ARF3P40994 183 aaRIP-Chip data3.45□□□□□ -1.86not detected
SEC4YFL005W IRC6P43615 237 aa3.45□□□□□ -1.86
SEC4YFL005W IRC8P47046 822 aa3.45□□□□□ -1.86
SEC4YFL005W LYS20P48570 428 aaKnown RBP3.45□□□□□ -1.86
SEC4YFL005W LCL3P53153 274 aa3.45□□□□□ -1.86
SEC4YFL005W YGR066CP53242 292 aa3.45□□□□□ -1.86
SEC4YFL005W YGR127WP53275 312 aa3.45□□□□□ -1.86
SEC4YFL005W MRPL19P53875 158 aa3.45□□□□□ -1.86
SEC4YFL005W TIM10P87108 93 aa3.45□□□□□ -1.86
SEC4YFL005W RPT6Q01939 405 aaKnown RBP3.45□□□□□ -1.86
SEC4YFL005W ARP10Q04549 284 aa3.45□□□□□ -1.86
SEC4YFL005W POS5Q06892 414 aa3.45□□□□□ -1.86
SEC4YFL005W FMP40Q08968 688 aaPredicted RBP3.45□□□□□ -1.86
SEC4YFL005W YER190C-BP0CX94 160 aa3.44□□□□□ -1.86
SEC4YFL005W YEL077W-AP0CX95 160 aa3.44□□□□□ -1.86
SEC4YFL005W YGR296C-BP0CX96 160 aa3.44□□□□□ -1.86
SEC4YFL005W YPL283W-BP0CX97 160 aa3.44□□□□□ -1.86
SEC4YFL005W YPR204C-AP0CX98 160 aa3.44□□□□□ -1.86
SEC4YFL005W OCA4P25366 362 aa3.44□□□□□ -1.86
SEC4YFL005W PUP3P25451 205 aaKnown RBP3.44□□□□□ -1.86
SEC4YFL005W YBR144CP34215 104 aa3.44□□□□□ -1.86
SEC4YFL005W REG2P38232 338 aa3.44□□□□□ -1.86
SEC4YFL005W UTP9P38882 575 aaKnown RBP3.44□□□□□ -1.86
SEC4YFL005W FLO5P38894 1075 aa3.44□□□□□ -1.86
SEC4YFL005W AFG3P39925 761 aa3.44□□□□□ -1.86
SEC4YFL005W PTR3P43606 678 aa3.44□□□□□ -1.86
SEC4YFL005W RMD8P43620 662 aa3.44□□□□□ -1.86
SEC4YFL005W VPS25P47142 202 aa3.44□□□□□ -1.86
SEC4YFL005W YPT11P48559 417 aa3.44□□□□□ -1.86
SEC4YFL005W VID30P53076 958 aa3.44□□□□□ -1.86
SEC4YFL005W ERG26P53199 349 aaKnown RBP3.44□□□□□ -1.86
SEC4YFL005W EMI2Q04409 500 aaKnown RBP3.44□□□□□ -1.86
SEC4YFL005W DPB4Q04603 196 aaKnown RBP3.44□□□□□ -1.86
SEC4YFL005W ATG26Q06321 1198 aa3.44□□□□□ -1.86
SEC4YFL005W ATX2Q12067 313 aa3.44□□□□□ -1.86
SEC4YFL005W YPR089WO13585 888 aa3.43□□□□□ -1.86
SEC4YFL005W ARG81P05085 880 aa3.43□□□□□ -1.86
SEC4YFL005W ARG3P05150 338 aa3.43□□□□□ -1.86
SEC4YFL005W DFR1P07807 211 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SEC4YFL005W RPB8P20436 146 aa3.43□□□□□ -1.86
SEC4YFL005W KGD1P20967 1014 aaKnown RBP3.43□□□□□ -1.86
SEC4YFL005W BOS1P25385 244 aa3.43□□□□□ -1.86
SEC4YFL005W PGS1P25578 521 aa3.43□□□□□ -1.86
SEC4YFL005W ECM32P32644 1121 aaKnown RBP3.43□□□□□ -1.86
SEC4YFL005W SCO2P38072 301 aa3.43□□□□□ -1.86
SEC4YFL005W RFC1P38630 861 aaKnown RBP3.43□□□□□ -1.86
SEC4YFL005W ARP1P38696 384 aa3.43□□□□□ -1.86
SEC4YFL005W DBP8P38719 431 aa3.43□□□□□ -1.86
SEC4YFL005W SPO22P40511 975 aa3.43□□□□□ -1.86
SEC4YFL005W APT1P49435 187 aaKnown RBP3.43□□□□□ -1.86
SEC4YFL005W STP1Q00947 519 aa3.43□□□□□ -1.86
SEC4YFL005W MRPL1Q04599 285 aa3.43□□□□□ -1.86
SEC4YFL005W MCP2Q06567 569 aa3.43□□□□□ -1.86
SEC4YFL005W RTT109Q07794 436 aa3.43□□□□□ -1.86
SEC4YFL005W TEN1Q07921 160 aa3.43□□□□□ -1.86
SEC4YFL005W BUD7Q08754 746 aa3.43□□□□□ -1.86
SEC4YFL005W CKA1P15790 372 aa3.42□□□□□ -1.86
SEC4YFL005W AIM17P23180 465 aaKnown RBP3.42□□□□□ -1.86
SEC4YFL005W BUD5P25300 642 aaPredicted RBP3.42□□□□□ -1.86
SEC4YFL005W IMG1P25626 169 aa3.42□□□□□ -1.86
SEC4YFL005W SYN8P31377 255 aa3.42□□□□□ -1.86
SEC4YFL005W MFT1P33441 392 aaKnown RBP3.42□□□□□ -1.86
SEC4YFL005W YBL055CP34220 418 aaPredicted RBP3.42□□□□□ -1.86
SEC4YFL005W SEF1P34228 1148 aa3.42□□□□□ -1.86
SEC4YFL005W NUP133P36161 1157 aa3.42□□□□□ -1.86
SEC4YFL005W ICS2P38284 255 aa3.42□□□□□ -1.86
SEC4YFL005W LEU5P38702 357 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms