RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 FZD1Q9UP38 647 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 TMX2Q9Y320 296 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 ME1P48163 572 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 GAS2L3Q86XJ1 694 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 BLIDQ8IZY5 108 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 SPICE1Q8N0Z3 855 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 SEC63Q9UGP8 760 aaKnown RBP20.21■□□□□ 0.83
PHGDH-232ENST00000641947 MARCKSP29966 332 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-232ENST00000641947 DLK2Q6UY11 383 aa20.2■□□□□ 0.82
PHGDH-232ENST00000641947 DAGLBQ8NCG7 672 aa20.2■□□□□ 0.82
PHGDH-232ENST00000641947 KCNG4Q8TDN1 519 aa20.2■□□□□ 0.82
PHGDH-232ENST00000641947 ARHGEF10LQ9HCE6 1279 aa20.2■□□□□ 0.82
PHGDH-232ENST00000641947 BRMS1Q9HCU9 246 aa20.2■□□□□ 0.82
PHGDH-232ENST00000641947 SYNPO2Q9UMS6 1093 aa20.2■□□□□ 0.82
PHGDH-232ENST00000641947 CALML3P27482 149 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 INPP5BP32019 993 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 NAPAP54920 295 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 GPR162Q16538 588 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 RILPL1Q5EBL4 403 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-232ENST00000641947 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 COA7Q96BR5 231 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 ZMYND12Q9H0C1 365 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 ADARB2Q9NS39 739 aaKnown RBP20.19■□□□□ 0.82
PHGDH-232ENST00000641947 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
PHGDH-232ENST00000641947 PARP14Q460N5 1801 aa20.19■□□□□ 0.82
PHGDH-232ENST00000641947 SYCE3A1L190 88 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 GOLGA6L4A6NEF3 574 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 NR1I2O75469 434 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 ASNSP08243 561 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 ATP2B1P20020 1258 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 ZNF445P59923 1031 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 PIK3AP1Q6ZUJ8 805 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 PCDHA6Q9UN73 950 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 PCDHA8Q9Y5H6 950 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 BMP3P12645 472 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 LMOD1P29536 600 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-232ENST00000641947 CCDC183Q5T5S1 534 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 MRVI1Q9Y6F6 885 aa20.18■□□□□ 0.82
PHGDH-232ENST00000641947 SCN4AP35499 1836 aa20.17■□□□□ 0.82
PHGDH-232ENST00000641947 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
PHGDH-232ENST00000641947 ZYXQ15942 572 aaKnown RBP20.17■□□□□ 0.82
PHGDH-232ENST00000641947 ADALQ6DHV7 355 aa20.17■□□□□ 0.82
PHGDH-232ENST00000641947 CCAR1Q8IX12 1150 aaKnown RBP20.17■□□□□ 0.82
PHGDH-232ENST00000641947 DACT1Q9NYF0 836 aa20.17■□□□□ 0.82
PHGDH-232ENST00000641947 MYH7BA7E2Y1 1941 aa20.17■□□□□ 0.82
PHGDH-232ENST00000641947 SMCO2A6NFE2 343 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 TMEM232C9JQI7 657 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 ZBTB5O15062 677 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 SNAP25P60880 206 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-232ENST00000641947 L3MBTL3Q96JM7 780 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-232ENST00000641947 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.16■□□□□ 0.82
PHGDH-232ENST00000641947 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 CTNND1O60716 968 aaKnown RBP20.16■□□□□ 0.82
PHGDH-232ENST00000641947 PPP6R2O75170 966 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 SNW1Q13573 536 aaKnown RBP20.16■□□□□ 0.82
PHGDH-232ENST00000641947 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 BTNL9Q6UXG8 535 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 SYAP1Q96A49 352 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-232ENST00000641947 ZNF341Q9BYN7 854 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 VCPKMTQ9H867 229 aa20.16■□□□□ 0.82
PHGDH-232ENST00000641947 A0A1W2PQ27 194 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 A0A1W2PQ64 194 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 A0A1W2PQD8 194 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 ESYT2A0FGR8 921 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 hCG_1984214I3L0E3 225 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 GRIN1Q05586 938 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 DGKZQ13574 1117 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 CDC37Q16543 378 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-232ENST00000641947 SYDE2Q5VT97 1194 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 GALNT17Q6IS24 598 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 ZNF713Q8N859 430 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-232ENST00000641947 FSIP1Q8NA03 581 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 ENGASEQ8NFI3 743 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 ZKSCAN4Q969J2 545 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-232ENST00000641947 CLIC6Q96NY7 704 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 GOPCQ9HD26 462 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 PPP2R3BQ9Y5P8 575 aa20.15■□□□□ 0.82
PHGDH-232ENST00000641947 TAL1P17542 331 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-232ENST00000641947 DEKP35659 375 aaKnown RBP20.14■□□□□ 0.81
PHGDH-232ENST00000641947 DCAF15Q66K64 600 aa20.14■□□□□ 0.81
PHGDH-232ENST00000641947 CCDC12Q8WUD4 166 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-232ENST00000641947 PTPRFP10586 1907 aa20.14■□□□□ 0.81
PHGDH-232ENST00000641947 A0A1B0GVL5 298 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 TRIM75PA6NK02 468 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 ADM5C9JUS6 153 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 TTC38Q5R3I4 469 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 MRPS27Q92552 414 aaKnown RBP20.13■□□□□ 0.81
PHGDH-232ENST00000641947 WRNIP1Q96S55 665 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 FBXO2Q9UK22 296 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-232ENST00000641947 ZNF174Q15697 407 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms