RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 LCORLQ8N3X6 602 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 DYNLL2Q96FJ2 89 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 UHRF1Q96T88 793 aaPredicted RBP18.1■□□□□ 0.49
SRRM4-204ENST00000641899 SLF1Q9BQI6 1058 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 SEZ6LQ9BYH1 1024 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 PBX4Q9BYU1 374 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 PRDM12Q9H4Q4 367 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 SLC28A3Q9HAS3 691 aa18.1■□□□□ 0.49
SRRM4-204ENST00000641899 ZNF214Q9UL59 606 aaPredicted RBP18.1■□□□□ 0.49
SRRM4-204ENST00000641899 A0A0G2JMZ2 1700 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 ARVCFO00192 962 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 ZBED4O75132 1171 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 CYP2D6P10635 497 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 AAK1Q2M2I8 961 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 TMEM240Q5SV17 173 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
SRRM4-204ENST00000641899 C16orf86Q6ZW13 317 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 ADAMTS19Q8TE59 1207 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 ABHD16BQ9H3Z7 469 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 ARMT1Q9H993 441 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 FBXO28Q9NVF7 368 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 FBXO40Q9UH90 709 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 EXOC6BQ9Y2D4 811 aa18.09■□□□□ 0.49
SRRM4-204ENST00000641899 ASGR1P07306 291 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 CSF2RAP15509 400 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 ACVR2BQ13705 512 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 GNASQ5JWF2 1037 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 FAM83BQ5T0W9 1011 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 C12orf60Q5U649 245 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
SRRM4-204ENST00000641899 FAM122AQ96E09 287 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 TTC28Q96AY4 2481 aa18.08■□□□□ 0.48
SRRM4-204ENST00000641899 TCRBV5S4A2TA0A5A2 114 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 USP17L12C9JPN9 530 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 USP17L21D6R901 530 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 CABYRO75952 493 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 MBD4O95243 580 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 CDK7P50613 346 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 RASIP1Q5U651 963 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 ZSCAN25Q6NSZ9 544 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 CEP85Q6P2H3 762 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 ZNF365Q70YC5 407 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 CLEC10AQ8IUN9 316 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 ANKRD35Q8N283 1001 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 RHPN1Q8TCX5 695 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 LENG1Q96BZ8 264 aaPredicted RBP18.07■□□□□ 0.48
SRRM4-204ENST00000641899 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 C1QTNF1Q9BXJ1 281 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 IL1RAPL2Q9NP60 686 aa18.07■□□□□ 0.48
SRRM4-204ENST00000641899 ZEB2O60315 1214 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 HMMRO75330 724 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 SNAI1O95863 264 aaPredicted RBP18.06■□□□□ 0.48
SRRM4-204ENST00000641899 FGBP02675 491 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 GJA9P57773 515 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 CCSAPQ6IQ19 270 aaPredicted RBP18.06■□□□□ 0.48
SRRM4-204ENST00000641899 HERVK_113Q902F9 699 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 PPP1R12CQ9BZL4 782 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 ZNF287Q9HBT7 754 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 IL23AQ9NPF7 189 aa18.06■□□□□ 0.48
SRRM4-204ENST00000641899 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.06■□□□□ 0.48
SRRM4-204ENST00000641899 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
SRRM4-204ENST00000641899 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 PBX2P40425 430 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 EVX2Q03828 476 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 CCDC85BQ15834 202 aaPredicted RBP18.05■□□□□ 0.48
SRRM4-204ENST00000641899 RPUSD2Q8IZ73 545 aaKnown RBP18.05■□□□□ 0.48
SRRM4-204ENST00000641899 CHST13Q8NET6 341 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 REPS2Q8NFH8 660 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
SRRM4-204ENST00000641899 MKNK2Q9HBH9 465 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 PAG1Q9NWQ8 432 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 SLC4A4Q9Y6R1 1079 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 PRUNE2Q8WUY3 3088 aa18.05■□□□□ 0.48
SRRM4-204ENST00000641899 NAV1Q8NEY1 1877 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 DNAJC25-GNG10A0A024R161 153 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 ACRP10323 421 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 ADD2P35612 726 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 PLA2G5P39877 138 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 CCDC144BQ3MJ40 725 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
SRRM4-204ENST00000641899 FAM126BQ8IXS8 530 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 CPXCR1Q8N123 301 aa18.04■□□□□ 0.48
SRRM4-204ENST00000641899 GRXCR1A8MXD5 290 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 PRKAB2O43741 272 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 FDX1P10109 184 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 OAZ1P54368 228 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 C16orf59Q7L2K0 433 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 HIPK3Q9H422 1215 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
SRRM4-204ENST00000641899 NYAP2Q9P242 653 aa18.03■□□□□ 0.48
SRRM4-204ENST00000641899 MYADML2A6NDP7 307 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 F5H6K3 240 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 MS4A1P11836 297 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 KLRC3Q07444 240 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.48
SRRM4-204ENST00000641899 AP5M1Q9H0R1 490 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 NKX2-4Q9H2Z4 354 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms