RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PGBD1Q96JS3 809 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 PIGSQ96S52 555 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 SH3GLB2Q9NR46 395 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 DDX19AQ9NUU7 478 aaKnown RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 GPRC5DQ9NZD1 345 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 ZBTB21Q9ULJ3 1066 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 MYH7BA7E2Y1 1941 aa10.15□□□□□ -0.79
PHGDH-219ENST00000641513 STXBP3O00186 592 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 TBC1D12O60347 775 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 DDNO94850 711 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-219ENST00000641513 TPM2P07951 284 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 VEGFAP15692 232 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-219ENST00000641513 LIG1P18858 919 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 SMARCA1P28370 1054 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 SLC16A2P36021 539 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 SLC35G1Q2M3R5 365 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 RILPL1Q5EBL4 403 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 ANGEL2Q5VTE6 544 aaKnown RBP10.14□□□□□ -0.79
PHGDH-219ENST00000641513 CCDC73Q6ZRK6 1079 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 BLIDQ8IZY5 108 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 JMYQ8N9B5 988 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 FSIP1Q8NA03 581 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 LINC00301Q8NCQ3 95 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 TRPM4Q8TD43 1214 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 MKL1Q969V6 931 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 SHISA4Q96DD7 197 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 DEFB129Q9H1M3 183 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 GOPCQ9HD26 462 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
PHGDH-219ENST00000641513 SMCHD1A6NHR9 2005 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 CCDC194A0A1B0GVG4 234 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 F5H6K3 240 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 NDUFB10O96000 172 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 SNHG28P0DPA3 235 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 MARCKSP29966 332 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-219ENST00000641513 CAP2P40123 477 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 EPS15P42566 896 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 KLRC3Q07444 240 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 ZYXQ15942 572 aaKnown RBP10.13□□□□□ -0.79
PHGDH-219ENST00000641513 DCAF15Q66K64 600 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 PIK3AP1Q6ZUJ8 805 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 ADGRF4Q8IZF3 695 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 NUP88Q99567 741 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-219ENST00000641513 FEZ1Q99689 392 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 RIOX1Q9H6W3 641 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 SH2D4AQ9H788 454 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 C6orf50Q9HD87 102 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 BARHL2Q9NY43 387 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-219ENST00000641513 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 PCDHA7Q9UN72 937 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
PHGDH-219ENST00000641513 PHIPQ8WWQ0 1821 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 SMCO2A6NFE2 343 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 TRIM75PA6NK02 468 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 ASNSP08243 561 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 CCDC192P0DO97 292 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 BMP3P12645 472 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 ECE1P42892 770 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 TOB1P50616 345 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-219ENST00000641513 SLC39A14Q15043 492 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 NBPF12Q5TAG4 269 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-219ENST00000641513 GALNT17Q6IS24 598 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 SAMD1Q6SPF0 538 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-219ENST00000641513 SPICE1Q8N0Z3 855 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 RASGRP4Q8TDF6 673 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 ACER1Q8TDN7 264 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 MRPS27Q92552 414 aaKnown RBP10.12□□□□□ -0.79
PHGDH-219ENST00000641513 COA7Q96BR5 231 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 HOOK2Q96ED9 719 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 TEPSINQ96N21 525 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 ZNF341Q9BYN7 854 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 NUP62CLQ9H1M0 184 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 JMJD4Q9H9V9 463 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 DACT1Q9NYF0 836 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 GGA3Q9NZ52 723 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-219ENST00000641513 PGAP2Q9UHJ9 254 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 SCN4AP35499 1836 aa10.12□□□□□ -0.79
PHGDH-219ENST00000641513 PNMA6FA0A0J9YX94 578 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 TMEM232C9JQI7 657 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 hCG_1984214I3L0E3 225 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 PPP6R2O75170 966 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 GNA11P29992 359 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 ADCY7P51828 1080 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 PTPAQ15257 358 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 ZNF174Q15697 407 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 CAMK4Q16566 473 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
PHGDH-219ENST00000641513 EARS2Q5JPH6 523 aaKnown RBP10.11□□□□□ -0.79
PHGDH-219ENST00000641513 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 PRAMEF18Q5VWM3 479 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
PHGDH-219ENST00000641513 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms