RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 COG2Q14746 738 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 SKIV2LQ15477 1246 aaKnown RBP10□□□□□ -0.81
SCARB2-226ENST00000640916 ZNF792Q3KQV3 632 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 PPP2R2DQ66LE6 453 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 CCDC174Q6PII3 467 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
SCARB2-226ENST00000640916 SPATA5Q8NB90 893 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 NUP133Q8WUM0 1156 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 CDCA7LQ96GN5 454 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 PHOX2BQ99453 314 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 FEZ1Q99689 392 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 SAP30BPQ9UHR5 308 aaKnown RBP10□□□□□ -0.81
SCARB2-226ENST00000640916 MCM3APO60318 1980 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 SYNRGQ9UMZ2 1314 aa10□□□□□ -0.81
SCARB2-226ENST00000640916 COL4A4P53420 1690 aaPredicted RBP9.99□□□□□ -0.81
SCARB2-226ENST00000640916 MOXD2PA6NHM9 499 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 ADCY6O43306 1168 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 FGBP02675 491 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 OTOP2Q7RTS6 562 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 ANKS1AQ92625 1134 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 TINF2Q9BSI4 451 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 MROH8Q9H579 483 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 COPRSQ9NQ92 184 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 SLC5A4Q9NY91 659 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 RAI14Q9P0K7 980 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 PCDHA11Q9Y5I1 949 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 ELP1O95163 1332 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 SCN5AQ14524 2016 aa9.99□□□□□ -0.81
SCARB2-226ENST00000640916 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 ARVCFO00192 962 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 CTAGE5O15320 804 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 LPXNO60711 386 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 PGK2P07205 417 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 AKR1A1P14550 325 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 CST5P28325 142 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-226ENST00000640916 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-226ENST00000640916 MCAMP43121 646 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 RAB3GAP1Q15042 981 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 HLA-CQ95604 372 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 CERS4Q9HA82 394 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 HOXC10Q9NYD6 342 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 MROH7Q68CQ1 1323 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 TRIOO75962 3097 aa9.98□□□□□ -0.81
SCARB2-226ENST00000640916 SNAI1O95863 264 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-226ENST00000640916 ASGR1P07306 291 aa9.97□□□□□ -0.81
SCARB2-226ENST00000640916 FCER1AP12319 257 aa9.97□□□□□ -0.81
SCARB2-226ENST00000640916 SHMT1P34896 483 aa9.97□□□□□ -0.81
SCARB2-226ENST00000640916 TFCP2Q12800 502 aa9.97□□□□□ -0.81
SCARB2-226ENST00000640916 MVPQ14764 893 aaKnown RBP9.97□□□□□ -0.81
SCARB2-226ENST00000640916 FAM178BQ8IXR5 827 aa9.97□□□□□ -0.81
SCARB2-226ENST00000640916 WNT8AQ9H1J5 351 aa9.97□□□□□ -0.81
SCARB2-226ENST00000640916 DIS3Q9Y2L1 958 aaKnown RBP9.97□□□□□ -0.81
SCARB2-226ENST00000640916 CA3P07451 260 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 DYNLL1P63167 89 aaKnown RBP9.96□□□□□ -0.82
SCARB2-226ENST00000640916 FOXK1P85037 733 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 TMEM132BQ14DG7 1078 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 SEPT2Q15019 361 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 ABCB5Q2M3G0 1257 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 CERKLQ49MI3 558 aaPredicted RBP9.96□□□□□ -0.82
SCARB2-226ENST00000640916 NAA16Q6N069 864 aaPredicted RBP9.96□□□□□ -0.82
SCARB2-226ENST00000640916 SPRED2Q7Z698 418 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 SLC43A3Q8NBI5 491 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 ATG4CQ96DT6 458 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 GLT1D1Q96MS3 346 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 TRIM34Q9BYJ4 488 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 KCNH6Q9H252 994 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
SCARB2-226ENST00000640916 ADAMTS5Q9UNA0 930 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.82
SCARB2-226ENST00000640916 SLC4A7Q9Y6M7 1214 aa9.96□□□□□ -0.82
SCARB2-226ENST00000640916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.95□□□□□ -0.82
SCARB2-226ENST00000640916 A0A0U1RQG5 324 aaPredicted RBP9.95□□□□□ -0.82
SCARB2-226ENST00000640916 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 APBB1O00213 710 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 DUSP11O75319 330 aaKnown RBP9.95□□□□□ -0.82
SCARB2-226ENST00000640916 BAG3O95817 575 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 HLA-DOAP06340 250 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 CCL23P55773 120 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 NKX3-2P78367 333 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 TAP1Q03518 808 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 GRB10Q13322 594 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 PLS1Q14651 629 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 POTEBQ6S5H4 581 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 SIAH1Q8IUQ4 282 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 GJD3Q8N144 294 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 MB21D1Q8N884 522 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 AGBL1Q96MI9 1066 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 UPF3AQ9H1J1 476 aaKnown RBP9.95□□□□□ -0.82
SCARB2-226ENST00000640916 EHD4Q9H223 541 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 MTIF3Q9H2K0 278 aaKnown RBP9.95□□□□□ -0.82
SCARB2-226ENST00000640916 LRP2BPQ9P2M1 347 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 SERPINB13Q9UIV8 391 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 GRIN2DO15399 1336 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 PTPRCP08575 1304 aa9.95□□□□□ -0.82
SCARB2-226ENST00000640916 TET1Q8NFU7 2136 aa9.94□□□□□ -0.82
SCARB2-226ENST00000640916 ATP2A2P16615 1042 aaKnown RBP9.94□□□□□ -0.82
SCARB2-226ENST00000640916 PDE4AP27815 886 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms