RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 SPZ1Q9BXG8 430 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 KIF9Q9HAQ2 790 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 TMCO1Q9UM00 188 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 ANO9A1A5B4 782 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 TRIM75PA6NK02 468 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 RNMTO43148 476 aaKnown RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 TRIM37O94972 964 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 SEC31AO94979 1220 aaKnown RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 VIL1P09327 827 aaKnown RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 CYP7A1P22680 504 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 MYO1EQ12965 1108 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 MCF2L2Q86YR7 1114 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 MIGA1Q8NAN2 632 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 MAK16Q9BXY0 300 aaKnown RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 VCPKMTQ9H867 229 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 CORO1CQ9ULV4 474 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 A0A1W2PQ27 194 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 A0A1W2PQ64 194 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 A0A1W2PQD8 194 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 SART1O43290 800 aaKnown RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 CALCOCO2Q13137 446 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 IQCB1Q15051 598 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 CTNNAL1Q9UBT7 734 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 MTMR6Q9Y217 621 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 UBN2Q6ZU65 1347 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 NR1I2O75469 434 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 DCTN3O75935 186 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 ATP5JP18859 108 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 PDE6CP51160 858 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 KBTBD12Q3ZCT8 623 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 TNNI3KQ59H18 835 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 GJC2Q5T442 439 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 SYCE1Q8N0S2 351 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 FPGT-TNNI3KV9GXZ4 949 aa9.08□□□□□ -0.96
NECAP1-227ENST00000640648 EDC4Q6P2E9 1401 aaKnown RBP9.08□□□□□ -0.96
NECAP1-227ENST00000640648 ERVK-7P63135 1459 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 MCF2LO15068 1137 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TPD52L2O43399 206 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 CASP14P31944 242 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 STAT6P42226 847 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TTC6Q86TZ1 520 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TEKT4Q8WW24 435 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TBC1D23Q9NUY8 699 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 CUL1Q13616 776 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TNIP1Q15025 636 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ANKRD20A4Q4UJ75 823 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ANKRD20A8PQ5CZ79 823 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ANKRD20A2Q5SQ80 823 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 IFIT1BQ5T764 474 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ANKRD20A1Q5TYW2 823 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TRMT1LQ7Z2T5 733 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 RBM12BQ8IXT5 1001 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 NBPF15Q8N660 670 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 PRPF38AQ8NAV1 312 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 CXorf38Q8TB03 319 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 HVCN1Q96D96 273 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 NUF2Q9BZD4 464 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 XPO4Q9C0E2 1151 aaKnown RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 PSMA7O14818 248 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 RASGRF2O14827 1237 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 RGS16O15492 202 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 KRT75O95678 551 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 UQCRFS1P1P0C7P4 283 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 RIPPLY1Q0D2K3 151 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TMEM266Q2M3C6 531 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 SPATA21Q7Z572 469 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 COG1Q8WTW3 980 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 MAIP1Q8WWC4 291 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 KAT14Q9H8E8 782 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 POLE3Q9NRF9 147 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TRPC6Q9Y210 931 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 IKBKGQ9Y6K9 419 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 MAGEA13PA6NCF6 341 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 B4E1Z4 1266 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 GCP02774 474 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ACTN3Q08043 901 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TUBA3CQ13748 450 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 KRT71Q3SY84 523 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 DENND2CQ68D51 928 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ARHGEF25Q86VW2 580 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 NLRP14Q86W24 1093 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 ESR2Q92731 530 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 PLIN2Q99541 437 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TPCN1Q9ULQ1 816 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 TSC22D4Q9Y3Q8 395 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 FHOD1Q9Y613 1164 aa9.07□□□□□ -0.96
NECAP1-227ENST00000640648 A0A0D9SFI3 127 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 KCNQ3O43525 872 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 MAN1A2O60476 641 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 GFAPP14136 432 aa9.06□□□□□ -0.96
NECAP1-227ENST00000640648 CTNNA1P35221 906 aaKnown RBP9.06□□□□□ -0.96
NECAP1-227ENST00000640648 MTA1Q13330 715 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms