RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 SMCR8Q8TEV9 937 aaPredicted RBP22.64■■□□□ 1.21
HLA-A-209ENST00000638375 KIFC2Q96AC6 838 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 UBA5Q9GZZ9 404 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 SAGE1Q9NXZ1 904 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 HOXC10Q9NYD6 342 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 TPCN1Q9ULQ1 816 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 NAP1L2Q9ULW6 460 aaPredicted RBP22.64■■□□□ 1.21
HLA-A-209ENST00000638375 GOLGA8AA7E2F4 631 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 TLR2O60603 784 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 PEX10O60683 326 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 TBC1D8O95759 1140 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 PDIA3P30101 505 aaKnown RBP22.63■■□□□ 1.21
HLA-A-209ENST00000638375 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
HLA-A-209ENST00000638375 ANKRD1Q15327 319 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 PRPF38AQ8NAV1 312 aaKnown RBP22.63■■□□□ 1.21
HLA-A-209ENST00000638375 FANCBQ8NB91 859 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 CHURC1Q8WUH1 139 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 FAM217BQ9NTX9 383 aaPredicted RBP22.63■■□□□ 1.21
HLA-A-209ENST00000638375 PRR12Q9ULL5 1215 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 ADAMTS5Q9UNA0 930 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 NID2Q14112 1375 aa22.63■■□□□ 1.21
HLA-A-209ENST00000638375 KLRF2D3W0D1 207 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 CNMDO75829 334 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 SYDE2Q5VT97 1194 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 NBPF11Q86T75 865 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 ZNF274Q96GC6 653 aaPredicted RBP22.62■■□□□ 1.21
HLA-A-209ENST00000638375 TXNRD2Q9NNW7 524 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 CPA4Q9UI42 421 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 A0A0G2JMZ2 1700 aa22.62■■□□□ 1.21
HLA-A-209ENST00000638375 VWA5AO00534 786 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 PLEKHA8P1O95397 391 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 BCRP11274 1271 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 CDC27P30260 824 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 KIF5BP33176 963 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 GCLCP48506 637 aaPredicted RBP22.61■■□□□ 1.21
HLA-A-209ENST00000638375 METAP2P50579 478 aaKnown RBP eCLIP22.61■■□□□ 1.21
HLA-A-209ENST00000638375 RTN1Q16799 776 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 C17orf99Q6UX52 265 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 REPS2Q8NFH8 660 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 BEGAINQ9BUH8 593 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 RBPJLQ9UBG7 517 aa22.61■■□□□ 1.21
HLA-A-209ENST00000638375 CD2BP2O95400 341 aaKnown RBP22.6■■□□□ 1.21
HLA-A-209ENST00000638375 LARGE1O95461 756 aa22.6■■□□□ 1.21
HLA-A-209ENST00000638375 GTF3C2Q8WUA4 911 aaPredicted RBP22.6■■□□□ 1.21
HLA-A-209ENST00000638375 PAGR1Q9BTK6 254 aa22.6■■□□□ 1.21
HLA-A-209ENST00000638375 BTBD7Q9P203 1132 aa22.6■■□□□ 1.21
HLA-A-209ENST00000638375 TSKSQ9UJT2 592 aa22.6■■□□□ 1.21
HLA-A-209ENST00000638375 CYTH3O43739 400 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 SNAP25P60880 206 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 CCT2P78371 535 aaKnown RBP22.59■■□□□ 1.21
HLA-A-209ENST00000638375 STK3Q13188 491 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 ME3Q16798 604 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 TMTC3Q6ZXV5 915 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 ADGRF4Q8IZF3 695 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 CMTR1Q8N1G2 835 aaKnown RBP22.59■■□□□ 1.21
HLA-A-209ENST00000638375 SRBD1Q8N5C6 995 aaKnown RBP22.59■■□□□ 1.21
HLA-A-209ENST00000638375 ANKRD13CQ8N6S4 541 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 SLC38A10Q9HBR0 1119 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 RBM28Q9NW13 759 aaKnown RBP22.59■■□□□ 1.21
HLA-A-209ENST00000638375 MORF4L1Q9UBU8 362 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 RABGAP1Q9Y3P9 1069 aa22.59■■□□□ 1.21
HLA-A-209ENST00000638375 ST18O60284 1047 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 ADD1P35611 737 aaKnown RBP22.58■■□□□ 1.21
HLA-A-209ENST00000638375 GNAQP50148 359 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 TMEM132BQ14DG7 1078 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 MB21D1Q8N884 522 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 IL27Q8NEV9 243 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 RANBP17Q9H2T7 1088 aaKnown RBP22.58■■□□□ 1.21
HLA-A-209ENST00000638375 RIOX1Q9H6W3 641 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 JMJD4Q9H9V9 463 aa22.58■■□□□ 1.21
HLA-A-209ENST00000638375 NCOA5Q9HCD5 579 aaKnown RBP22.58■■□□□ 1.21
HLA-A-209ENST00000638375 PFKFB2O60825 505 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 ZBED4O75132 1171 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 ERVK-9P63128 1117 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 ERVK-24P63145 666 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 FUT2Q10981 343 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 FAM110CQ1W6H9 321 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 Q3C1V9 767 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 LZTS2Q9BRK4 669 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 SPZ1Q9BXG8 430 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 VAT1LQ9HCJ6 419 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 ZNF214Q9UL59 606 aaPredicted RBP22.57■■□□□ 1.2
HLA-A-209ENST00000638375 LIMCH1Q9UPQ0 1083 aa22.57■■□□□ 1.2
HLA-A-209ENST00000638375 DHX16O60231 1041 aaKnown RBP22.56■■□□□ 1.2
HLA-A-209ENST00000638375 HSPA1AP0DMV8 641 aaKnown RBP22.56■■□□□ 1.2
HLA-A-209ENST00000638375 HSPA1BP0DMV9 641 aaKnown RBP22.56■■□□□ 1.2
HLA-A-209ENST00000638375 FDX1P10109 184 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 SMARCA1P28370 1054 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 SCRN1Q12765 414 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 PPP2R5BQ15173 497 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 MTMR8Q96EF0 704 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 SLKQ9H2G2 1235 aaPredicted RBP22.56■■□□□ 1.2
HLA-A-209ENST00000638375 ZNF536O15090 1300 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 CNTNAP5Q8WYK1 1306 aa22.56■■□□□ 1.2
HLA-A-209ENST00000638375 PCNTO95613 3336 aa22.55■■□□□ 1.2
HLA-A-209ENST00000638375 GPR25O00155 361 aa22.55■■□□□ 1.2
HLA-A-209ENST00000638375 ST3GAL1Q11201 340 aa22.55■■□□□ 1.2
HLA-A-209ENST00000638375 NTRK3Q16288 839 aa22.55■■□□□ 1.2
HLA-A-209ENST00000638375 CDC37Q16543 378 aaPredicted RBP22.55■■□□□ 1.2
HLA-A-209ENST00000638375 CCDC174Q6PII3 467 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms