RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SLC1A4P43007 532 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
PNKP-228ENST00000637325 IL17RBQ9NRM6 502 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 COBLO75128 1261 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 MCCP23508 829 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 CNGA1P29973 690 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 KCTD2Q14681 263 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
PNKP-228ENST00000637325 ANKLE1Q8NAG6 615 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 CHURC1Q8WUH1 139 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
PNKP-228ENST00000637325 ZNF214Q9UL59 606 aaPredicted RBP16.3■□□□□ 0.2
PNKP-228ENST00000637325 MCM3APO60318 1980 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
PNKP-228ENST00000637325 CYP2C19P33261 490 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 STAT2P52630 851 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 NECAB2Q7Z6G3 386 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 UBE2Q1Q7Z7E8 422 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 FAM160B2Q86V87 743 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 STAG1Q8WVM7 1258 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
PNKP-228ENST00000637325 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 ALPK3Q96L96 1907 aa16.29■□□□□ 0.2
PNKP-228ENST00000637325 FDX1P10109 184 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
PNKP-228ENST00000637325 CCDC96Q2M329 555 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 RCSD1Q6JBY9 416 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 KCTD1Q719H9 257 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 RUFY2Q8WXA3 655 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 ESR2Q92731 530 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
PNKP-228ENST00000637325 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 OGDHLQ9ULD0 1010 aa16.28■□□□□ 0.2
PNKP-228ENST00000637325 MYH6P13533 1939 aa16.27■□□□□ 0.2
PNKP-228ENST00000637325 PGK2P07205 417 aa16.27■□□□□ 0.2
PNKP-228ENST00000637325 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.2
PNKP-228ENST00000637325 DIS3LQ8TF46 1054 aaKnown RBP16.27■□□□□ 0.2
PNKP-228ENST00000637325 DCAF4Q8WV16 495 aa16.27■□□□□ 0.2
PNKP-228ENST00000637325 DDX11Q96FC9 970 aa16.27■□□□□ 0.2
PNKP-228ENST00000637325 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
PNKP-228ENST00000637325 ATP2A1O14983 1001 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 MSCO60682 206 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 NOVP48745 357 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 OAZ1P54368 228 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 TTC14Q96N46 770 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 DDX20Q9UHI6 824 aaKnown RBP16.26■□□□□ 0.19
PNKP-228ENST00000637325 RIPK3Q9Y572 518 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
PNKP-228ENST00000637325 RAD50Q92878 1312 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 PLA2G6O60733 806 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 NT5C2P49902 561 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 CCDC178Q5BJE1 867 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 LHX8Q68G74 356 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
PNKP-228ENST00000637325 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
PNKP-228ENST00000637325 NEDD4P46934 1319 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 H0YGN5 161 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 EVI5O60447 810 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 CYBAP13498 195 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 CHMLP26374 656 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 PRAMEF19Q5SWL8 479 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 CCDC174Q6PII3 467 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 IQCA1Q86XH1 822 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 ANKRD35Q8N283 1001 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 KRT23Q9C075 422 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 PRR12Q9ULL5 1215 aa16.24■□□□□ 0.19
PNKP-228ENST00000637325 B4E1Z4 1266 aa16.23■□□□□ 0.19
PNKP-228ENST00000637325 KDM4AO75164 1064 aa16.23■□□□□ 0.19
PNKP-228ENST00000637325 IGHA2P01877 340 aa16.23■□□□□ 0.19
PNKP-228ENST00000637325 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
PNKP-228ENST00000637325 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
PNKP-228ENST00000637325 GPCPD1Q9NPB8 672 aa16.23■□□□□ 0.19
PNKP-228ENST00000637325 FRMPD2Q68DX3 1309 aaPredicted RBP16.22■□□□□ 0.19
PNKP-228ENST00000637325 SEPT4O43236 478 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 SNAP25P60880 206 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 TKFCQ3LXA3 575 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 TTBK2Q6IQ55 1244 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
PNKP-228ENST00000637325 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 AGBL1Q96MI9 1066 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 IL25Q9H293 177 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms