RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 SEPT2Q15019 361 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 USP50Q70EL3 339 aaPredicted RBP9.48□□□□□ -0.89
GABRA1-216ENST00000637044 OTUD5Q96G74 571 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 STK24Q9Y6E0 443 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 MLKLQ8NB16 471 aa9.48□□□□□ -0.89
GABRA1-216ENST00000637044 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
GABRA1-216ENST00000637044 YDJCA8MPS7 323 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 TMEM232C9JQI7 657 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 CCNT1O60563 726 aaKnown RBP9.47□□□□□ -0.89
GABRA1-216ENST00000637044 PFKFB1P16118 471 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 HUNKP57058 714 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 PNMA2Q9UL42 364 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 SAMM50Q9Y512 469 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 N4BP3O15049 544 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 GOLGA8HP0CJ92 632 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 LUZP1Q86V48 1076 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 UBA5Q9GZZ9 404 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 FRMPD2Q68DX3 1309 aaPredicted RBP9.47□□□□□ -0.89
GABRA1-216ENST00000637044 C5P01031 1676 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 BICDL2A1A5D9 508 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 NR1I2O75469 434 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 NSMFQ6X4W1 530 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 TMTC3Q6ZXV5 915 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 SLC51AQ86UW1 340 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 ENAHQ8N8S7 591 aaPredicted RBP9.47□□□□□ -0.89
GABRA1-216ENST00000637044 LINC00301Q8NCQ3 95 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 CHAMP1Q96JM3 812 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 INCENPQ9NQS7 918 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 ZNF541Q9H0D2 1346 aa9.47□□□□□ -0.89
GABRA1-216ENST00000637044 MYH14Q7Z406 1995 aaKnown RBP9.47□□□□□ -0.89
GABRA1-216ENST00000637044 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 NLRP12P59046 1061 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 SYCP1Q15431 976 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 GRIK5Q16478 980 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 CCDC174Q6PII3 467 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 CCDC112Q8NEF3 446 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 MAP3K9P80192 1104 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 CCDC40Q4G0X9 1142 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 PPP4R3AQ6IN85 833 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 SV2BQ7L1I2 683 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 NEK8Q86SG6 692 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 RIOK1Q9BRS2 568 aaKnown RBP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 GLIS2Q9BZE0 524 aaPredicted RBP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 ELP3Q9H9T3 547 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 ARGLU1Q9NWB6 273 aaPredicted RBP9.46□□□□□ -0.89
GABRA1-216ENST00000637044 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 CLIC4Q9Y696 253 aa9.46□□□□□ -0.89
GABRA1-216ENST00000637044 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 BMP3P12645 472 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 OSBPP22059 807 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 POSTNQ15063 836 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 SPDYE2Q495Y8 402 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 ARHGAP29Q52LW3 1261 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
GABRA1-216ENST00000637044 BIN2Q9UBW5 565 aaPredicted RBP9.46□□□□□ -0.9
GABRA1-216ENST00000637044 LRWD1Q9UFC0 647 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 ZDHHC9Q9Y397 364 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 AFDNP55196 1824 aaKnown RBP9.46□□□□□ -0.9
GABRA1-216ENST00000637044 BRWD3Q6RI45 1802 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 A0A0U1RQG5 324 aaPredicted RBP9.46□□□□□ -0.9
GABRA1-216ENST00000637044 KCNA3P22001 575 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 ZNF157P51786 506 aaPredicted RBP9.46□□□□□ -0.9
GABRA1-216ENST00000637044 CHMP4BP1P59074 171 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 PTPN14Q15678 1187 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 CALCRLQ16602 461 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 USH1GQ495M9 461 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 NOM1Q5C9Z4 860 aaKnown RBP9.46□□□□□ -0.9
GABRA1-216ENST00000637044 CCDC186Q7Z3E2 898 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 FAM83AQ86UY5 434 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 C7orf43Q8WVR3 580 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 MRIQ9BWK5 157 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 PCDHA4Q9UN74 947 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 ZKSCAN5Q9Y2L8 839 aa9.46□□□□□ -0.9
GABRA1-216ENST00000637044 LTBP3Q9NS15 1303 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 LAD1O00515 517 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 AKR1B1P15121 316 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 TXKP42681 527 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 NBPF12Q5TAG4 269 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-216ENST00000637044 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 ANKRD13AQ8IZ07 590 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 GPKOWQ92917 476 aaPredicted RBP eCLIP9.45□□□□□ -0.9
GABRA1-216ENST00000637044 TIGD1Q96MW7 591 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 EPB41L4AQ9HCS5 686 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-216ENST00000637044 LAMB4A4D0S4 1761 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 GOLGA6L9A6NEM1 432 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 UBE2Q2LH0YL09 131 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 ADGRA1Q86SQ6 560 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms