RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	UBE4A	Q14139	1066 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	SKIDA1	Q1XH10	827 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	OLFM4	Q6UX06	510 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	RASGRP2	Q7LDG7	609 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	CCDC13	Q8IYE1	715 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	OR8K1	Q8NGG5	319 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	PUS7L	Q9H0K6	701 aa	Known RBP	12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	CNNM2	Q9H8M5	875 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	KIF9	Q9HAQ2	790 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	PIH1D3	Q9NQM4	214 aa	Known RBP	12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	IRAK4	Q9NWZ3	460 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	NARF	Q9UHQ1	456 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	SAMM50	Q9Y512	469 aa		12.04	□□□□□ -0.48
CHD2-223	ENST00000636306	PTPDC1	A2A3K4	754 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	EME2	A4GXA9	379 aa	Predicted RBP	12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	TMEM232	C9JQI7	657 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	SEMA3E	O15041	775 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	KCNQ2	O43526	872 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	AHCYL1	O43865	530 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	JAK2	O60674	1132 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	ZPR1	O75312	459 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	CDKL5	O76039	1030 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	CEBPZ	Q03701	1054 aa	Known RBP	12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	MEX3C	Q5U5Q3	659 aa	Known RBP	12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	ALS2CL	Q60I27	953 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	PDILT	Q8N807	584 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	NSUN7	Q8NE18	718 aa	Known RBP	12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	FBXW7	Q969H0	707 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	CCDC51	Q96ER9	411 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	TMEM87B	Q96K49	555 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	EPN3	Q9H201	632 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	DUOX1	Q9NRD9	1551 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	PNPLA7	Q6ZV29	1317 aa		12.03	□□□□□ -0.48
CHD2-223	ENST00000636306	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	DTNB	O60941	627 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	RAB27A	P51159	221 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	NDUFA8	P51970	172 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	AMPD2	Q01433	879 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CHRND	Q07001	517 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CKAP4	Q07065	602 aa	Known RBP	12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	GOLGA8F	Q08AF8	430 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	GOLGA8DP	Q0D2H9	430 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	RASGRF1	Q13972	1273 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CAVIN4	Q5BKX8	364 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	SLC10A5	Q5PT55	438 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CYB5D1	Q6P9G0	228 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	PI16	Q6UXB8	463 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CEP57	Q86XR8	500 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	SLC35F6	Q8N357	371 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	NOA1	Q8NC60	698 aa	Known RBP	12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	LMBR1	Q8WVP7	490 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	P3H4	Q92791	437 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	CCDC47	Q96A33	483 aa	Known RBP	12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	OSBPL9	Q96SU4	736 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	NAPB	Q9H115	298 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	RTCB	Q9Y3I0	505 aa	Known RBP	12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	RPS6KL1	Q9Y6S9	549 aa		12.02	□□□□□ -0.48
CHD2-223	ENST00000636306	PDS5A	Q29RF7	1337 aa	Known RBP	12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	TCRBV5S4A2T	A0A5A2	114 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	GOLGA8B	A8MQT2	603 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	FECH	P22830	423 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	PDIA3	P30101	505 aa	Known RBP	12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	C6orf89	Q6UWU4	347 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	MFN1	Q8IWA4	741 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	RPUSD2	Q8IZ73	545 aa	Known RBP	12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	HELB	Q8NG08	1087 aa	Predicted RBP	12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	CCDC114	Q96M63	670 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	SETDB2	Q96T68	719 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	MTA3	Q9BTC8	594 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	ANKRD2	Q9GZV1	360 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	SEC31B	Q9NQW1	1179 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	INTS13	Q9NVM9	706 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	FANCL	Q9NW38	375 aa		12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	CCNL1	Q9UK58	526 aa	Predicted RBP	12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	TPX2	Q9ULW0	747 aa	Known RBP	12.02	□□□□□ -0.49
CHD2-223	ENST00000636306	ZNF804B	A4D1E1	1349 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	ERICH2	A1L162	156 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	CPLX1	O14810	134 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	FES	P07332	822 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	CMA1	P23946	247 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	ATP2B2	Q01814	1243 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	AKAP17A	Q02040	695 aa	Known RBP	12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	APBA1	Q02410	837 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	RNF187	Q5TA31	235 aa	Predicted RBP	12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	FAM228A	Q86W67	206 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	APLF	Q8IW19	511 aa	Predicted RBP	12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	FUK	Q8N0W3	1084 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	CCHCR1	Q8TD31	782 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	SPDL1	Q96EA4	605 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	NLRP3	Q96P20	1036 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	DESI2	Q9BSY9	194 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	SELENOO	Q9BVL4	669 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	LRRC2	Q9BYS8	371 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	KRT23	Q9C075	422 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	CENPH	Q9H3R5	247 aa		12.01	□□□□□ -0.49
CHD2-223	ENST00000636306	RNF41	Q9H4P4	317 aa	Predicted RBP	12.01	□□□□□ -0.49

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