RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 DCDC2Q9UHG0 476 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 MYH8P13535 1937 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 HNRNPCP07910 306 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 BFSP1Q12934 665 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 TRIM71Q2Q1W2 868 aaKnown RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 CWF19L2Q2TBE0 894 aaKnown RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 SLC9C1Q4G0N8 1177 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 TRIM68Q6AZZ1 485 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 C11orf88Q6PI97 169 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 MAP3K15Q6ZN16 1313 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC141Q6ZP82 1450 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC151A5D8V7 595 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 GOLGA8JA6NMD2 632 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 KRT19P08727 400 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 PARP1P09874 1014 aaKnown RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 AP1S2P56377 157 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 LAMC2Q13753 1193 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 PIP4K2CQ8TBX8 421 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 NLRP3Q96P20 1036 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 MYCBPQ99417 103 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 PDCD10Q9BUL8 212 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 ASPSCR1Q9BZE9 553 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 SESN1Q9Y6P5 492 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 TSPOAP1O95153 1857 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 GOLGA8TH3BQL2 631 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 RASGRF2O14827 1237 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 GOLGA8HP0CJ92 632 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 ASIC2Q16515 512 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 MCMDC2Q4G0Z9 681 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 NUTM1Q86Y26 1132 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 RAPGEF3O95398 923 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 CA4P22748 312 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 STX2P32856 288 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 SP4Q02446 784 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 LRCH2Q5VUJ6 765 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 TMTC3Q6ZXV5 915 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 FRA10AC1Q70Z53 315 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 EFHBQ8N7U6 833 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 CDK19Q9BWU1 502 aa6.56□□□□□ -1.36
SCN1A-212ENST00000636194 SRPRBQ9Y5M8 271 aaKnown RBP6.56□□□□□ -1.36
SCN1A-212ENST00000636194 ARHGAP10A1A4S6 786 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 BAG2O95816 211 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 GCKP35557 465 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 PHKG1Q16816 387 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 MYLK2Q9H1R3 596 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 ARIH2O95376 493 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 IGBP1P78318 339 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RAD51AP2Q09MP3 1159 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 PAK2Q13177 524 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 POTEEQ6S8J3 1075 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 LDHAL6AQ6ZMR3 332 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 FLCNQ8NFG4 579 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 ZBTB18Q99592 522 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 SMARCAD1Q9H4L7 1026 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 MRPL40Q9NQ50 206 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 FGFR1OP2Q9NVK5 253 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 LRRD1A4D1F6 860 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 CEP104O60308 925 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 TRIM37O94972 964 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 HDAC4P56524 1084 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 OCA2Q04671 838 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 PICALMQ13492 652 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 PPP1R2P3Q6NXS1 205 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 ANKRD2Q9GZV1 360 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 N4BP1O75113 896 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RECQLP46063 649 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 AARS2Q5JTZ9 985 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RSRC2Q7L4I2 434 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 SRLQ86TD4 932 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 DCLK2Q8N568 766 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 ASZ1Q8WWH4 475 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 HEATR1Q9H583 2144 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RTL1A6NKG5 1358 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 A0A0B4J269 797 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RGS16O15492 202 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 ECM2O94769 699 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 PAMP19021 973 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 GPR1P46091 355 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 TUBB3Q13509 450 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 TNFAIP1Q13829 316 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 C16orf87Q6PH81 154 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 METTL13Q8N6R0 699 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 FARP1Q9Y4F1 1045 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 PTPRGP23470 1445 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RP1P56715 2156 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 TRAF5O00463 557 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 APOA1P02647 267 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 BRD3Q15059 726 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 GNPTABQ3T906 1256 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 MYLK4Q86YV6 388 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RFWD2Q8NHY2 731 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 ABTB1Q969K4 478 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms