RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 BRD3Q15059 726 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 SLF1Q9BQI6 1058 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 CCDC151A5D8V7 595 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 TRIM49BA6NDI0 452 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 H7C1D1 291 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 FECHP22830 423 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 CYP2C19P33261 490 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 KCNQ4P56696 695 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 STIM1Q13586 685 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 LONRF2Q1L5Z9 754 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 STAG2Q8N3U4 1231 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 PLIN2Q99541 437 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 MKNK2Q9HBH9 465 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
PSPC1-207ENST00000635251 PARP1P09874 1014 aaKnown RBP12.05□□□□□ -0.48
PSPC1-207ENST00000635251 UBA7P41226 1012 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
PSPC1-207ENST00000635251 SPTY2D1Q68D10 685 aaPredicted RBP12.05□□□□□ -0.48
PSPC1-207ENST00000635251 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 CCDC24Q8N4L8 307 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 C4orf32Q8N8J7 132 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 FUT8Q9BYC5 575 aa12.05□□□□□ -0.48
PSPC1-207ENST00000635251 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
PSPC1-207ENST00000635251 PDS5AQ29RF7 1337 aaKnown RBP12.05□□□□□ -0.48
PSPC1-207ENST00000635251 PP2D1A8MPX8 630 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 ERLIN1O75477 346 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 ABL1P00519 1130 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 GNAQP50148 359 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 NBPF5PQ86XG9 351 aaPredicted RBP12.04□□□□□ -0.48
PSPC1-207ENST00000635251 AMOTL1Q8IY63 956 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 ADSSL1Q8N142 457 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 DYNLL2Q96FJ2 89 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 TRIM47Q96LD4 638 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 ANKZF1Q9H8Y5 726 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 ZCCHC17Q9NP64 241 aaKnown RBP12.04□□□□□ -0.48
PSPC1-207ENST00000635251 MYO1AQ9UBC5 1043 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 CTAGE15A4D2H0 777 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 RHOXF2BP0C7M4 288 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 CTAGE8P0CG41 777 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 TSPY3P0CV98 308 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 TSPY8P0CW00 308 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 TUBB4BP68371 445 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 INF2Q27J81 1249 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 SLC10A5Q5PT55 438 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 CTAGE6Q86UF2 777 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 CTAGE4Q8IX94 777 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 MB21D1Q8N884 522 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 RHOXF2Q9BQY4 288 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.04□□□□□ -0.48
PSPC1-207ENST00000635251 GUCA1BQ9UMX6 200 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 LAMB1P07942 1786 aa12.04□□□□□ -0.48
PSPC1-207ENST00000635251 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
PSPC1-207ENST00000635251 PSMA7O14818 248 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 PIP4K2BP78356 416 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 GPS2Q13227 327 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 GRM4Q14833 912 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 WHAMMP3Q1A5X7 153 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
PSPC1-207ENST00000635251 CHP1Q99653 195 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 UBXN6Q9BZV1 441 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
PSPC1-207ENST00000635251 EPN1Q9Y6I3 576 aaPredicted RBP12.03□□□□□ -0.48
PSPC1-207ENST00000635251 MYH13Q9UKX3 1938 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 TTC26A0AVF1 554 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 NDUFA10O95299 355 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 ARHGAP25P42331 645 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 TYW1BQ6NUM6 668 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 TMEM60Q9H2L4 133 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
PSPC1-207ENST00000635251 LGALS16A8MUM7 142 aa12.02□□□□□ -0.49
PSPC1-207ENST00000635251 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
PSPC1-207ENST00000635251 LDHBP07195 334 aaKnown RBP12.02□□□□□ -0.49
PSPC1-207ENST00000635251 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
PSPC1-207ENST00000635251 PMS1P54277 932 aaKnown RBP12.02□□□□□ -0.49
PSPC1-207ENST00000635251 MCM6Q14566 821 aa12.02□□□□□ -0.49
PSPC1-207ENST00000635251 KCNB1Q14721 858 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms