RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ST3GAL1Q11201 340 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 MOGSQ13724 837 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 CPLX2Q6PUV4 134 aaKnown RBP16.76■□□□□ 0.27
LINC00339-208ENST00000634934 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 BRI3BPQ8WY22 251 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 LZTS2Q9BRK4 669 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 PTPRFP10586 1907 aa16.76■□□□□ 0.27
LINC00339-208ENST00000634934 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 DTNBO60941 627 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 FLOT1O75955 427 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 CLEC17AQ6ZS10 378 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
LINC00339-208ENST00000634934 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 VAT1LQ9HCJ6 419 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 FEM1BQ9UK73 627 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 HSP90AA1P07900 732 aaKnown RBP16.75■□□□□ 0.27
LINC00339-208ENST00000634934 STAT2P52630 851 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 CATSPERGQ6ZRH7 1159 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 KIFC2Q96AC6 838 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 PTPN18Q99952 460 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
LINC00339-208ENST00000634934 IGF2BP3O00425 579 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC00339-208ENST00000634934 FOXN1O15353 648 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 CDKL5O76039 1030 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.273e-16■■■■■ 34.8
LINC00339-208ENST00000634934 SYDE2Q5VT97 1194 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 PHKBQ93100 1093 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
LINC00339-208ENST00000634934 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 TRPA1O75762 1119 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 CTDNEP1O95476 244 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 IFNAR1P17181 557 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 TM4SF4P48230 202 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
LINC00339-208ENST00000634934 SREBF2Q12772 1141 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 CUL4AQ13619 759 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 NTRK3Q16288 839 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 SLC35G1Q2M3R5 365 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 SLC26A6Q9BXS9 759 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 RNF186Q9NXI6 227 aa16.73■□□□□ 0.27
LINC00339-208ENST00000634934 hCG_1642624A0A1W2PR95 340 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 PTPDC1A2A3K4 754 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 PDHXO00330 501 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 CYTH3O43739 400 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 JAK2O60674 1132 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 PLA2G6O60733 806 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 OSBPP22059 807 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 AKAP17AQ02040 695 aaKnown RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 COG2Q14746 738 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 ANKRD23Q86SG2 305 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 HOMER1Q86YM7 354 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 PRPF38AQ8NAV1 312 aaKnown RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 BEGAINQ9BUH8 593 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 PRR12Q9ULL5 1215 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
LINC00339-208ENST00000634934 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
LINC00339-208ENST00000634934 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
LINC00339-208ENST00000634934 SMARCA1P28370 1054 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 INHBEP58166 350 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 SNAP25P60880 206 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 FUT2Q10981 343 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.27
LINC00339-208ENST00000634934 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
LINC00339-208ENST00000634934 RIOX1Q9H6W3 641 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 JMJD4Q9H9V9 463 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 HOXC10Q9NYD6 342 aa16.71■□□□□ 0.27
LINC00339-208ENST00000634934 CTDP1Q9Y5B0 961 aaPredicted RBP16.71■□□□□ 0.27
LINC00339-208ENST00000634934 LOC285556D6RIA3 1793 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms