RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 CEP290O15078 2479 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 RANBP6O60518 1105 aaKnown RBP12.76□□□□□ -0.37
CHD2-217ENST00000629136 FCER1AP12319 257 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 BMP3P12645 472 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
CHD2-217ENST00000629136 TTC22Q5TAA0 569 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
CHD2-217ENST00000629136 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 STAG1Q8WVM7 1258 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 GMCL1Q96IK5 515 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 MAML3Q96JK9 1138 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 TEX13BQ9BXU2 312 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 PFASO15067 1338 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 NEDD4P46934 1319 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
CHD2-217ENST00000629136 H0YGN5 161 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 HIP1O00291 1037 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 PGK2P07205 417 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 COPB2P35606 906 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 STAT2P52630 851 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
CHD2-217ENST00000629136 DNAH12Q6ZR08 3092 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 NECAB2Q7Z6G3 386 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 DPF3Q92784 378 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 MMP19Q99542 508 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 RIPK3Q9Y572 518 aa12.75□□□□□ -0.37
CHD2-217ENST00000629136 ZNF536O15090 1300 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 TMEM232C9JQI7 657 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 MCCP23508 829 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 SLC1A4P43007 532 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 KCTD2Q14681 263 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 KCTD1Q719H9 257 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHD2-217ENST00000629136 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
CHD2-217ENST00000629136 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
CHD2-217ENST00000629136 DDX20Q9UHI6 824 aaKnown RBP12.74□□□□□ -0.37
CHD2-217ENST00000629136 RANBP2P49792 3224 aaKnown RBP12.73□□□□□ -0.37
CHD2-217ENST00000629136 ZBED4O75132 1171 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 COL6A1P12109 1028 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 CNGA1P29973 690 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 OAZ1P54368 228 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 C11orf49Q9H6J7 331 aa12.73□□□□□ -0.37
CHD2-217ENST00000629136 RAD50Q92878 1312 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 DNAJC25-GNG10A0A024R161 153 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 MSCO60682 206 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 PLA2G6O60733 806 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 PCP11498 1178 aaKnown RBP12.72□□□□□ -0.37
CHD2-217ENST00000629136 PRAMEF19Q5SWL8 479 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 RCSD1Q6JBY9 416 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 ISY1Q9ULR0 285 aaKnown RBP12.72□□□□□ -0.37
CHD2-217ENST00000629136 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
CHD2-217ENST00000629136 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
CHD2-217ENST00000629136 ZNF213O14771 459 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 SEPT4O43236 478 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 EVI5O60447 810 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 SLC34A2O95436 690 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 FDX1P10109 184 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 TOP1P11387 765 aaKnown RBP12.71□□□□□ -0.37
CHD2-217ENST00000629136 SLC4A3P48751 1232 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.37
CHD2-217ENST00000629136 HABP4Q5JVS0 413 aaKnown RBP12.71□□□□□ -0.37
CHD2-217ENST00000629136 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 DCAF4Q8WV16 495 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 FGD4Q96M96 766 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 TINF2Q9BSI4 451 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
CHD2-217ENST00000629136 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.37
CHD2-217ENST00000629136 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
CHD2-217ENST00000629136 CTDP1Q9Y5B0 961 aaPredicted RBP12.71□□□□□ -0.37
CHD2-217ENST00000629136 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
CHD2-217ENST00000629136 PDHBP11177 359 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 SNAP25P60880 206 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 ESR2Q92731 530 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 ZKSCAN3Q9BRR0 538 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 PRO3102Q9H379 93 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
CHD2-217ENST00000629136 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
CHD2-217ENST00000629136 B4E1Z4 1266 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms