RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 USP17L11C9JVI0 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L18D6R9N7 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L22D6RA61 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L17D6RBQ6 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L19D6RCP7 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L20D6RJB6 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 DUSP11O75319 330 aaKnown RBP7.63□□□□□ -1.19
LINC00649-220ENST00000628906 DDX58O95786 925 aaKnown RBP7.63□□□□□ -1.19
LINC00649-220ENST00000628906 ICAM3P32942 547 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 DLX2Q07687 328 aaPredicted RBP7.63□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L24Q0WX57 530 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 PTPROQ16827 1216 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 CAVIN4Q5BKX8 364 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 TCEAL5Q5H9L2 206 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 POTEHQ6S545 545 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 KSR2Q6VAB6 950 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 CATSPERGQ6ZRH7 1159 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 SHCBP1Q8NEM2 672 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 WDR66Q8TBY9 1149 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 RUBCNQ92622 972 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 TINF2Q9BSI4 451 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 MOV10L1Q9BXT6 1211 aaKnown RBP7.63□□□□□ -1.19
LINC00649-220ENST00000628906 SEZ6LQ9BYH1 1024 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 MTUS1Q9ULD2 1270 aa7.63□□□□□ -1.19
LINC00649-220ENST00000628906 MYO18BQ8IUG5 2567 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 PI4KAP2A4QPH2 592 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 EYA4O95677 639 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 ASNSP08243 561 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 NKX3-2P78367 333 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 IRX5P78411 483 aaPredicted RBP7.62□□□□□ -1.19
LINC00649-220ENST00000628906 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 LRSAM1Q6UWE0 723 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 DEFB128Q7Z7B8 93 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 RPAINQ86UA6 219 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 CRACR2BQ8N4Y2 399 aaPredicted RBP7.62□□□□□ -1.19
LINC00649-220ENST00000628906 PI4KAP1Q8N8J0 262 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 C12orf42Q96LP6 360 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 RAD9AQ99638 391 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 HAUS7Q99871 368 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 CNNM1Q9NRU3 951 aa7.62□□□□□ -1.19
LINC00649-220ENST00000628906 FARP1Q9Y4F1 1045 aaPredicted RBP7.62□□□□□ -1.19
LINC00649-220ENST00000628906 GRIN2DO15399 1336 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 BAIAP3O94812 1187 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 ERCC3P19447 782 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 RFC2P35250 354 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 CLCN5P51795 746 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 GJA9P57773 515 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 JAG1P78504 1218 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 FOXO4P98177 505 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 NEXNQ0ZGT2 675 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 CLUL1Q15846 466 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 PTPN21Q16825 1174 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 GNASQ5JWF2 1037 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 ASTLQ6HA08 431 aaPredicted RBP7.61□□□□□ -1.19
LINC00649-220ENST00000628906 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 DCLK2Q8N568 766 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 FBXO22Q8NEZ5 403 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 ZNF594Q96JF6 807 aaPredicted RBP7.61□□□□□ -1.19
LINC00649-220ENST00000628906 TRPV6Q9H1D0 765 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 UPF3AQ9H1J1 476 aaKnown RBP7.61□□□□□ -1.19
LINC00649-220ENST00000628906 NSUN3Q9H649 340 aaKnown RBP7.61□□□□□ -1.19
LINC00649-220ENST00000628906 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 FAM184BQ9ULE4 1060 aa7.61□□□□□ -1.19
LINC00649-220ENST00000628906 DIS3Q9Y2L1 958 aaKnown RBP7.61□□□□□ -1.19
LINC00649-220ENST00000628906 CLSPNQ9HAW4 1339 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 CNOT1A5YKK6 2376 aaKnown RBP7.6□□□□□ -1.19
LINC00649-220ENST00000628906 DCDC2BA2VCK2 349 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 SPDYE16A6NNV3 312 aaPredicted RBP7.6□□□□□ -1.19
LINC00649-220ENST00000628906 CTAGE5O15320 804 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 B4GALT4O60513 344 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 GJB5O95377 273 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 C6orf222P0C671 652 aaPredicted RBP7.6□□□□□ -1.19
LINC00649-220ENST00000628906 PRDX5P30044 214 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 RIPK4P57078 832 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 RTKNQ9BST9 563 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 ZBED2Q9BTP6 218 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 MROH8Q9H579 483 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 HERC5Q9UII4 1024 aaKnown RBP7.6□□□□□ -1.19
LINC00649-220ENST00000628906 CD207Q9UJ71 328 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 TET1Q8NFU7 2136 aa7.6□□□□□ -1.19
LINC00649-220ENST00000628906 ZNF462Q96JM2 2506 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 SIP14410 1827 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 ITPR1Q14643 2758 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 PRR5-ARHGAP8B1AHC4 643 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 H3BNC9 293 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 CABYRO75952 493 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 PROS1P07225 676 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 ARHGAP8P85298 464 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 PICALMQ13492 652 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 ITGA7Q13683 1181 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 ANGPT1Q15389 498 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 CCDC57Q2TAC2 916 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 CYP2W1Q8TAV3 490 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 FAM163AQ96GL9 167 aaPredicted RBP7.59□□□□□ -1.19
LINC00649-220ENST00000628906 CDCA7LQ96GN5 454 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 MSLNLQ96KJ4 702 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 C17orf80Q9BSJ5 609 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 SPATC1LQ9H0A9 340 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 SPC25Q9HBM1 224 aa7.59□□□□□ -1.19
LINC00649-220ENST00000628906 CNPY2Q9Y2B0 182 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms