RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 IQCA1Q86XH1 822 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 ZC3H15Q8WU90 426 aaKnown RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 ERO1AQ96HE7 468 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 PGBD1Q96JS3 809 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 YY1AP1Q9H869 796 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 RAVER2Q9HCJ3 691 aaKnown RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 ATP8A2Q9NTI2 1148 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 ZNF446Q9NWS9 450 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 U3KPZ7 1027 aaPredicted RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 ALAS1P13196 640 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 RASA1P20936 1047 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 LRMPQ12912 555 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 COL13A1Q5TAT6 717 aaPredicted RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 Q6ZUG5 572 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 NYAP1Q6ZVC0 841 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 RGS22Q8NE09 1264 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 RBM46Q8TBY0 533 aaKnown RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 BRI3BPQ8WY22 251 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 VPS33BQ9H267 617 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 RPAP3Q9H6T3 665 aaPredicted RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 TMOD4Q9NZQ9 345 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 CCDC85CA6NKD9 419 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 RAD51AP2Q09MP3 1159 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 Q3C1V9 767 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 ZNF280CQ8ND82 737 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 KAT14Q9H8E8 782 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 IL17RBQ9NRM6 502 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 HELLSQ9NRZ9 838 aa7.12□□□□□ -1.27
CHD2-215ENST00000628375 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.12□□□□□ -1.27
CHD2-215ENST00000628375 GAKO14976 1311 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 TNKSO95271 1327 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 CASP8AP2Q9UKL3 1982 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 FOXN1O15353 648 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 F13A1P00488 732 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ASNSP08243 561 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 CRHR2Q13324 411 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 PRAMEF19Q5SWL8 479 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 RNF20Q5VTR2 975 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 SLFN13Q68D06 897 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 BLOC1S2Q6QNY1 142 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 TBC1D5Q92609 795 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ESR2Q92731 530 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 KCNB2Q92953 911 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ATG4CQ96DT6 458 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 NEK1Q96PY6 1258 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ST7Q9NRC1 585 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 KCND1Q9NSA2 647 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ZNF215Q9UL58 517 aaPredicted RBP7.11□□□□□ -1.27
CHD2-215ENST00000628375 TRIM17Q9Y577 477 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ATP6V1DQ9Y5K8 247 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.11□□□□□ -1.27
CHD2-215ENST00000628375 MRVI1Q9Y6F6 885 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 MYO5AQ9Y4I1 1855 aaKnown RBP7.11□□□□□ -1.27
CHD2-215ENST00000628375 KLF18A0A0U1RQI7 1052 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 CCDC69A6NI79 296 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 ELNP15502 786 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 H2AFXP16104 143 aaPredicted RBP7.11□□□□□ -1.27
CHD2-215ENST00000628375 CDC25BP30305 580 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 PPP4CP60510 307 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 TPD52L1Q16890 204 aaPredicted RBP7.11□□□□□ -1.27
CHD2-215ENST00000628375 MUM1L1Q5H9M0 696 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 NBPF11Q86T75 865 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 COA7Q96BR5 231 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 IDI2Q9BXS1 227 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 LSG1Q9H089 658 aaKnown RBP7.11□□□□□ -1.27
CHD2-215ENST00000628375 NBPF3Q9H094 633 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 SNED1Q8TER0 1413 aa7.11□□□□□ -1.27
CHD2-215ENST00000628375 STX6O43752 255 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 HOXA13P31271 388 aaPredicted RBP7.1□□□□□ -1.27
CHD2-215ENST00000628375 ZNF75DP51815 510 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 BMS1Q14692 1282 aaKnown RBP7.1□□□□□ -1.27
CHD2-215ENST00000628375 WTAPQ15007 396 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 SPRYD7Q5W111 196 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.1□□□□□ -1.27
CHD2-215ENST00000628375 SH3TC2Q8TF17 1288 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 GPKOWQ92917 476 aaPredicted RBP eCLIP7.1□□□□□ -1.272e-11■■□□□ 12.7
CHD2-215ENST00000628375 AGBL1Q96MI9 1066 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 DHX36Q9H2U1 1008 aaKnown RBP7.1□□□□□ -1.27
CHD2-215ENST00000628375 NRBP1Q9UHY1 535 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 FHOD1Q9Y613 1164 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 DOCK2Q92608 1830 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 LRRC37AA6NMS7 1700 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 PTPDC1A2A3K4 754 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 PHF20L1A8MW92 1017 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 CPLX1O14810 134 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 ENTPD3O75355 529 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 CFBP00751 764 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 SYT1P21579 422 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 CALML3P27482 149 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 CEBPZQ03701 1054 aaKnown RBP7.1□□□□□ -1.27
CHD2-215ENST00000628375 ERO1BQ86YB8 467 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 SCYL3Q8IZE3 742 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 PNMA1Q8ND90 353 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 CD99L2Q8TCZ2 262 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 FAM163AQ96GL9 167 aaPredicted RBP7.1□□□□□ -1.27
CHD2-215ENST00000628375 TMEM47Q9BQJ4 181 aa7.1□□□□□ -1.27
CHD2-215ENST00000628375 CREBZFQ9NS37 354 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms