RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 COL11A1P12107 1806 aaPredicted RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 FLOT1O75955 427 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 HSP90AA1P07900 732 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 IFNAR1P17181 557 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 C1QTNF8P60827 252 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 GRM1Q13255 1194 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 NTRK3Q16288 839 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 SYDE2Q5VT97 1194 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 TTBK2Q6IQ55 1244 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 ANKRD23Q86SG2 305 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 TRIM22Q8IYM9 498 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 SRBD1Q8N5C6 995 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 BRI3BPQ8WY22 251 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 MYPNQ86TC9 1320 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 CNTNAP5Q8WYK1 1306 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 OSBPP22059 807 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 SLC16A2P36021 539 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 IRX3P78415 501 aaPredicted RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 ST3GAL1Q11201 340 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 COG2Q14746 738 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 GPAT2Q6NUI2 795 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 INTS4Q96HW7 963 aaKnown RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 UBA5Q9GZZ9 404 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 RIOX1Q9H6W3 641 aa11.5□□□□□ -0.57
APLF-207ENST00000627740 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
APLF-207ENST00000627740 FDX1P10109 184 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 HSPA6P17066 643 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
APLF-207ENST00000627740 OTUD7BQ6GQQ9 843 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 ADGRF4Q8IZF3 695 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
APLF-207ENST00000627740 KIFC2Q96AC6 838 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 RRP36Q96EU6 259 aaKnown RBP11.49□□□□□ -0.57
APLF-207ENST00000627740 RNF26Q9BY78 433 aaPredicted RBP11.49□□□□□ -0.57
APLF-207ENST00000627740 ZCCHC17Q9NP64 241 aaKnown RBP11.49□□□□□ -0.57
APLF-207ENST00000627740 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 PRR12Q9ULL5 1215 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
APLF-207ENST00000627740 STK36Q9NRP7 1315 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 FUT2Q10981 343 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 NBPF11Q86T75 865 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 PHKBQ93100 1093 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 SLC26A6Q9BXS9 759 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 VAT1LQ9HCJ6 419 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 WDR33Q9C0J8 1336 aaKnown RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 PTPDC1A2A3K4 754 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 PDHXO00330 501 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 CYTH3O43739 400 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 CTDNEP1O95476 244 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 DSG3P32926 999 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 KIF23Q02241 960 aaPredicted RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 SMARCC2Q8TAQ2 1214 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 ASCC2Q9H1I8 757 aaPredicted RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 SMC3Q9UQE7 1217 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 CTDP1Q9Y5B0 961 aaPredicted RBP11.48□□□□□ -0.57
APLF-207ENST00000627740 THSD7BQ9C0I4 1608 aa11.48□□□□□ -0.57
APLF-207ENST00000627740 ZBED4O75132 1171 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 DEXIO95424 95 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 TM4SF4P48230 202 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 SLC35G1Q2M3R5 365 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 GTF3C2Q8WUA4 911 aaPredicted RBP11.47□□□□□ -0.57
APLF-207ENST00000627740 WASF1Q92558 559 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 MTMR8Q96EF0 704 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 PARK7Q99497 189 aaKnown RBP11.47□□□□□ -0.57
APLF-207ENST00000627740 PTPN18Q99952 460 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
APLF-207ENST00000627740 ORC3Q9UBD5 711 aaPredicted RBP11.47□□□□□ -0.57
APLF-207ENST00000627740 KIF3AQ9Y496 699 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
APLF-207ENST00000627740 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 ZBTB5O15062 677 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 MAP2K2P36507 400 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 HTRA3P83110 453 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 CDC37Q16543 378 aaPredicted RBP11.47□□□□□ -0.57
APLF-207ENST00000627740 LBX2Q6XYB7 198 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 FAM43AQ8N2R8 423 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 MB21D1Q8N884 522 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 PIGSQ96S52 555 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 SLC38A10Q9HBR0 1119 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
APLF-207ENST00000627740 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms