RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 MYH16Q9H6N6 1097 aa10.22□□□□□ -0.77
SPTAN1-212ENST00000627441 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
SPTAN1-212ENST00000627441 GRIN2DO15399 1336 aa10.22□□□□□ -0.77
SPTAN1-212ENST00000627441 SPEGQ15772 3267 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 CTAGE5O15320 804 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 MBTPS2O43462 519 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 PDE8BO95263 885 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 CST5P28325 142 aaPredicted RBP10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 PUM1Q14671 1186 aaKnown RBP eCLIP10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 TCEAL5Q5H9L2 206 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 CCDC30Q5VVM6 783 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 RPUSD2Q8IZ73 545 aaKnown RBP10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 LINS1Q8NG48 757 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 KLHDC4Q8TBB5 520 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 ZNF384Q8TF68 577 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 C12orf42Q96LP6 360 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 TINF2Q9BSI4 451 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 ZBTB21Q9ULJ3 1066 aa10.21□□□□□ -0.77
SPTAN1-212ENST00000627441 FLNBO75369 2602 aaKnown RBP10.21□□□□□ -0.78
SPTAN1-212ENST00000627441 MAST4O15021 2626 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 STRNO43815 780 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 ASNSP08243 561 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 ARP10275 920 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 PTGS1P23219 599 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 BEX3Q00994 111 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 SLC43A3Q8NBI5 491 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 DNAAF4Q8WXU2 420 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 PABPC5Q96DU9 382 aaKnown RBP10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 KAZALD1Q96I82 304 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 SPATC1LQ9H0A9 340 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 PNNQ9H307 717 aaKnown RBP10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 CLDND1Q9NY35 253 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 NRBP1Q9UHY1 535 aa10.2□□□□□ -0.78
SPTAN1-212ENST00000627441 FRYQ5TBA9 3013 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 MROH7-TTC4A0A0A0MT08 1334 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 SALL1Q9NSC2 1324 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 ERVK-21P61565 698 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 COL19A1Q14993 1142 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 NCAPG2Q86XI2 1143 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 TMEM105Q8N8V8 129 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 ACER1Q8TDN7 264 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 C17orf80Q9BSJ5 609 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 RPAP3Q9H6T3 665 aaPredicted RBP10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 DLL3Q9NYJ7 618 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 OTOGLQ3ZCN5 2332 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
SPTAN1-212ENST00000627441 ZZEF1O43149 2961 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 KIF16BQ96L93 1317 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 LINC01553A4QN01 128 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 KIF28PB7ZC32 967 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 STXBP3O00186 592 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 CYP2C9P11712 490 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 PSMC6P62333 389 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 DEFB103AP81534 67 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 RPAINQ86UA6 219 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 SHCBP1Q8NEM2 672 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 SUCLG2Q96I99 432 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 FEZ1Q99689 392 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 HERC5Q9UII4 1024 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 ZHX1Q9UKY1 873 aaPredicted RBP10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 FAM50BQ9Y247 325 aa10.18□□□□□ -0.78
SPTAN1-212ENST00000627441 ASH1LQ9NR48 2969 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 ASTN1O14525 1302 aa10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 DUSP11O75319 330 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 SNAI1O95863 264 aaPredicted RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 IFIT1P09914 478 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 PLS1Q14651 629 aa10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 ZNF792Q3KQV3 632 aa10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 DZIP1Q86YF9 867 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 CRACR2BQ8N4Y2 399 aaPredicted RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 TGS1Q96RS0 853 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 POP1Q99575 1024 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 UPF3AQ9H1J1 476 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 SLC5A4Q9NY91 659 aa10.17□□□□□ -0.78
SPTAN1-212ENST00000627441 MYH1P12882 1939 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 GPR75-ASB3A0A0A6YYF3 556 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 F6X3S4 739 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 TBX10O75333 385 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 GH2P01242 217 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 PFKMP08237 780 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 PHKA1P46020 1223 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 GJA9P57773 515 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 FLIIQ13045 1269 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 PUM3Q15397 648 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 TCTN1Q2MV58 587 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 ABRAQ8N0Z2 381 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 PCSK9Q8NBP7 692 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 SH2B1Q9NRF2 756 aaPredicted RBP10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 TRMT13Q9NUP7 481 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 FAM184BQ9ULE4 1060 aa10.16□□□□□ -0.78
SPTAN1-212ENST00000627441 CACNA1FO60840 1977 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms