RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 BARHL2Q9NY43 387 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 RTEL1Q9NZ71 1219 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 VPS54Q9P1Q0 977 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 KCNJ14Q9UNX9 436 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 TMX2Q9Y320 296 aa8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 ASTN2O75129 1339 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 FRMPD2Q68DX3 1309 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 GREB1LQ9C091 1923 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 DICER1Q9UPY3 1922 aaKnown RBP8.68□□□□□ -1.02
PTP4A1-206ENST00000627002 PNMA6FA0A0J9YX94 578 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 IQCA1LA6NCM1 817 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 GOLGA6L4A6NEF3 574 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 GLTPD2A6NH11 291 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 BTBD18B2RXH4 712 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 F5H6K3 240 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 RAD21O60216 631 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 YEATS4O95619 227 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 NDUFB10O96000 172 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 JAG1P78504 1218 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 KLRC3Q07444 240 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 SLC35G1Q2M3R5 365 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 RILPL1Q5EBL4 403 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 NBPF12Q5TAG4 269 aaPredicted RBP8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 HEATR3Q7Z4Q2 680 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 DAGLBQ8NCG7 672 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 KCNG4Q8TDN1 519 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 PIBF1Q8WXW3 757 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 SYAP1Q96A49 352 aaPredicted RBP8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 UBA5Q9GZZ9 404 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 ZNF112Q9UJU3 913 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 RCOR1Q9UKL0 485 aa8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 ISY1Q9ULR0 285 aaKnown RBP8.67□□□□□ -1.02
PTP4A1-206ENST00000627002 A0A1W2PRG0 241 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 ESYT2A0FGR8 921 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 STXBP3O00186 592 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 ZBTB5O15062 677 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 MAP3K13O43283 966 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 BMP3P12645 472 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 GNA11P29992 359 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 EPHX2P34913 555 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 NAPAP54920 295 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 HTRA3P83110 453 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 TRAF1Q13077 416 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 WWC2Q6AWC2 1192 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 BTNL9Q6UXG8 535 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 KCTD1Q719H9 257 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 RASGRP2Q7LDG7 609 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 HOMER1Q86YM7 354 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 ADGRF4Q8IZF3 695 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 BLIDQ8IZY5 108 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 BICD2Q8TD16 824 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 MTMR8Q96EF0 704 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 USP28Q96RU2 1077 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 PIGSQ96S52 555 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 VCPKMTQ9H867 229 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 JMJD4Q9H9V9 463 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 VAT1LQ9HCJ6 419 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 NOL7Q9UMY1 257 aaKnown RBP8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
PTP4A1-206ENST00000627002 PLA2G6O60733 806 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 BMP15O95972 392 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 ECE1P42892 770 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 TRAPPC10P48553 1259 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 CEBPZQ03701 1054 aaKnown RBP8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 IKQ13123 557 aaPredicted RBP8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 NR5A1Q13285 461 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 STK38Q15208 465 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 SF3A1Q15459 793 aaKnown RBP8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 SYDE2Q5VT97 1194 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 ANO1Q5XXA6 986 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 LHX8Q68G74 356 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 PNMA8AQ86V59 439 aaPredicted RBP8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 FAM160B2Q86V87 743 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 SCYL3Q8IZE3 742 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 LINC00301Q8NCQ3 95 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 GPT2Q8TD30 523 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 ACER1Q8TDN7 264 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 OXER1Q8TDS5 423 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 CHURC1Q8WUH1 139 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 LPAR1Q92633 364 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 SHISA4Q96DD7 197 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 WRNIP1Q96S55 665 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 FEZ1Q99689 392 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 ZMYND12Q9H0C1 365 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 GLT8D2Q9H1C3 349 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 CPVLQ9H3G5 476 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 RRAGCQ9HB90 399 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 AS3MTQ9HBK9 375 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 C6orf50Q9HD87 102 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms