RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 WNK3Q9BYP7 1800 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 KRT9P35527 623 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 UBXN1Q04323 297 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 CYP26C1Q6V0L0 522 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 PLIN2Q99541 437 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 ZCCHC17Q9NP64 241 aaKnown RBP12.7□□□□□ -0.38
VARS2-213ENST00000625423 DISC1Q9NRI5 854 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 CTAGE9A4FU28 777 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 DZIP1Q86YF9 867 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 RASSF8Q8NHQ8 419 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 SLF1Q9BQI6 1058 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 FUT8Q9BYC5 575 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 UBXN6Q9BZV1 441 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 FAM193AP78312 1265 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 NAALADL2Q58DX5 795 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 CEP112Q8N8E3 955 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 TMEM60Q9H2L4 133 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 PDS5AQ29RF7 1337 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 CCDC194A0A1B0GVG4 234 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 PARP1P09874 1014 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 PMS1P54277 932 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 LONRF2Q1L5Z9 754 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 DTHD1Q6ZMT9 781 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 IRF2BP1Q8IU81 584 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 ANKRD2Q9GZV1 360 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 ANKZF1Q9H8Y5 726 aa12.69□□□□□ -0.38
VARS2-213ENST00000625423 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
VARS2-213ENST00000625423 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 CYP2C19P33261 490 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 ARHGAP25P42331 645 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 USP5P45974 858 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 TRIM14Q14142 442 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 INF2Q27J81 1249 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 ADSSL1Q8N142 457 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 CHP1Q99653 195 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 H7C1D1 291 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 PES1O00541 588 aaKnown RBP12.68□□□□□ -0.38
VARS2-213ENST00000625423 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 NBPF5PQ86XG9 351 aaPredicted RBP12.68□□□□□ -0.38
VARS2-213ENST00000625423 DGKHQ86XP1 1220 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 PCDHA6Q9UN73 950 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 PCDHA8Q9Y5H6 950 aa12.68□□□□□ -0.38
VARS2-213ENST00000625423 M0R2N6 131 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 NAPGQ99747 312 aaPredicted RBP12.67□□□□□ -0.38
VARS2-213ENST00000625423 MKNK2Q9HBH9 465 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 TTC26A0AVF1 554 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 ZBTB9Q96C00 473 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 SPATA31A5Q5VU36 1347 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 SPATA31A7Q8IWB4 1347 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
VARS2-213ENST00000625423 CCDC66A2RUB6 948 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 CYTH3O43739 400 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 UBA7P41226 1012 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 GRM4Q14833 912 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 BRD3Q15059 726 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
VARS2-213ENST00000625423 PNKPQ96T60 521 aa12.67□□□□□ -0.38
VARS2-213ENST00000625423 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.67□□□□□ -0.38
VARS2-213ENST00000625423 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
VARS2-213ENST00000625423 TUBB2AQ13885 445 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 TUBB2BQ9BVA1 445 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 TRIM10Q9UDY6 481 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
VARS2-213ENST00000625423 KLRC4O43908 158 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 TSPY3P0CV98 308 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 TSPY8P0CW00 308 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 LRRC15Q8TF66 581 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
VARS2-213ENST00000625423 EPN1Q9Y6I3 576 aaPredicted RBP12.66□□□□□ -0.38
VARS2-213ENST00000625423 NDUFA10O95299 355 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 DIXDC1Q155Q3 683 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
VARS2-213ENST00000625423 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 RHOXF2Q9BQY4 288 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
VARS2-213ENST00000625423 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 STXBP3O00186 592 aa12.65□□□□□ -0.38
VARS2-213ENST00000625423 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms