RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 TCF7P36402 384 aaPredicted RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 CBX3Q13185 183 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 CNGA3Q16281 694 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 NCCRP1Q6ZVX7 275 aaPredicted RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 CCDC24Q8N4L8 307 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 MIGA1Q8NAN2 632 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 FAM89AQ96GI7 184 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 ZNF594Q96JF6 807 aaPredicted RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 VCX3BQ9H321 246 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 GALNT8Q9NY28 637 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
USB1-216ENST00000624720 ITGB1BP2Q9UKP3 347 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 OVOS2A0A0G2JMS6 1433 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 B4DLN1 442 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 NEMFO60524 1076 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 CSPG5O95196 566 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 ENDOUP21128 410 aaKnown RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 TRIM58Q8NG06 486 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 CEP295NLQ96MC4 621 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 SLC4A9Q96Q91 983 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 OXCT2Q9BYC2 517 aaPredicted RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 PLEKHA4Q9H4M7 779 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 CORO1CQ9ULV4 474 aaPredicted RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 ZBTB1Q9Y2K1 713 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 PHRF1Q9P1Y6 1649 aaKnown RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 SEC31AO94979 1220 aaKnown RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 FUT4P22083 530 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 CCBE1Q6UXH8 406 aaPredicted RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 CEP112Q8N8E3 955 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 MARCH10Q8NA82 808 aaPredicted RBP10.25□□□□□ -0.77
USB1-216ENST00000624720 ERP27Q96DN0 273 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 TIMM22Q9Y584 194 aa10.25□□□□□ -0.77
USB1-216ENST00000624720 LMBRD2Q68DH5 695 aaPredicted RBP10.24□□□□□ -0.77
USB1-216ENST00000624720 NDUFAF2Q8N183 169 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 ZBTB8BQ8NAP8 495 aaPredicted RBP10.24□□□□□ -0.77
USB1-216ENST00000624720 HVCN1Q96D96 273 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 KAZALD1Q96I82 304 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 BABAM1Q9NWV8 329 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 ZNF652Q9Y2D9 606 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 GOLGA8AA7E2F4 631 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 MYO1FO00160 1098 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 EBAG9O00559 213 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 SGTAO43765 313 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 AKR1B10O60218 316 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 PDE1AP54750 535 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 OXCT1P55809 520 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 RASSF7Q02833 373 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 WTAPQ15007 396 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 LINS1Q8NG48 757 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 HOOK2Q96ED9 719 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 EDC3Q96F86 508 aaKnown RBP10.24□□□□□ -0.77
USB1-216ENST00000624720 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 AS3MTQ9HBK9 375 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 KLC4Q9NSK0 619 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 TLR7Q9NYK1 1049 aaKnown RBP10.24□□□□□ -0.77
USB1-216ENST00000624720 TMED5Q9Y3A6 229 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
USB1-216ENST00000624720 EVI5O60447 810 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 SMNDC1O75940 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
USB1-216ENST00000624720 HALP42357 657 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 GCKRQ14397 625 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 HLFQ16534 295 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 CFAP58Q5T655 872 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 LLGL2Q6P1M3 1020 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 LMBR1LQ6UX01 489 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 PDGFDQ9GZP0 370 aaPredicted RBP10.24□□□□□ -0.77
USB1-216ENST00000624720 ZWILCHQ9H900 591 aa10.24□□□□□ -0.77
USB1-216ENST00000624720 HEG1Q9ULI3 1381 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 HOXB7P09629 217 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 HSPA8P11142 646 aaKnown RBP10.23□□□□□ -0.77
USB1-216ENST00000624720 RPL17P18621 184 aaKnown RBP10.23□□□□□ -0.77
USB1-216ENST00000624720 MX1P20591 662 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 HOXD12P35452 270 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 BIRC3Q13489 604 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 TTC22Q5TAA0 569 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 KAZNQ674X7 775 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 CREB3L3Q68CJ9 461 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 AACSQ86V21 672 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 BPHLQ86WA6 291 aaPredicted RBP10.23□□□□□ -0.77
USB1-216ENST00000624720 DRC7Q8IY82 874 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 SUN5Q8TC36 379 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 SCYL1Q96KG9 808 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 NRDE2Q9H7Z3 1164 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 USP21Q9UK80 565 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 FAM25EA8MYX2 175 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 ERVV-2B6SEH9 535 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 H3BQF6 201 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 NDUFAB1O14561 156 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 CHGBP05060 677 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 CCT8P50990 548 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 PHEXP78562 749 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 FAM160A1Q05DH4 1040 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms