RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CUEDC2Q9H467 287 aa13.1□□□□□ -0.31
ATRX-214ENST00000624166 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 CHUKO15111 745 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 FLOT1O75955 427 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 RPL13P26373 211 aaKnown RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 SSR1P43307 286 aaKnown RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 NR5A1Q13285 461 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 UBE4AQ14139 1066 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 TTC19Q6DKK2 380 aaPredicted RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.316e-8■■■■■ 28.5
ATRX-214ENST00000624166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATRX-214ENST00000624166 CETN3O15182 167 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 GGCXP38435 758 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 C2orf54Q08AI8 447 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 C6orf163Q5TEZ5 329 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 NCAPGQ9BPX3 1015 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 THAP9Q9H5L6 903 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 A0A1B0GTH6 734 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 ADORA1P30542 326 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 SARNPP82979 210 aaKnown RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATRX-214ENST00000624166 GLE1Q53GS7 698 aaKnown RBP13.09□□□□□ -0.31
ATRX-214ENST00000624166 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 CAMSAP1Q5T5Y3 1602 aa13.09□□□□□ -0.31
ATRX-214ENST00000624166 B4DLN1 442 aa13.08□□□□□ -0.31
ATRX-214ENST00000624166 BLIDQ8IZY5 108 aa13.08□□□□□ -0.31
ATRX-214ENST00000624166 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.31
ATRX-214ENST00000624166 PUS3Q9BZE2 481 aaKnown RBP13.08□□□□□ -0.31
ATRX-214ENST00000624166 ODF2LQ9ULJ1 636 aa13.08□□□□□ -0.31
ATRX-214ENST00000624166 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 PCCAP05165 728 aaPredicted RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 TEX33O43247 280 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 PRDM1O75626 825 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 GNA14O95837 355 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 MB21D1Q8N884 522 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 NHEJ1Q9H9Q4 299 aaPredicted RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.08□□□□□ -0.32
ATRX-214ENST00000624166 NKIRAS1Q9NYS0 192 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 STIM2Q9P246 746 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
ATRX-214ENST00000624166 KIF28PB7ZC32 967 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 DDAH1O94760 285 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 SCG2P13521 617 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 NR1D1P20393 614 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 LTKP29376 864 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 PPP1R7Q15435 360 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 LRWD1Q9UFC0 647 aa13.08□□□□□ -0.32
ATRX-214ENST00000624166 ALDH3A1P30838 453 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 MTF1Q14872 753 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 INTS8Q75QN2 995 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 RUBCNQ92622 972 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 IRX2Q9BZI1 471 aaPredicted RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 KCNK9Q9NPC2 374 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 CPSF2Q9P2I0 782 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 CTDNEP1O95476 244 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 CORO7P57737 925 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 LZTS2Q9BRK4 669 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 ZNF609O15014 1411 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 NR1I3Q14994 352 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 EPSTI1Q96J88 318 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 TACO1Q9BSH4 297 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 MRPL44Q9H9J2 332 aaKnown RBP13.07□□□□□ -0.32
ATRX-214ENST00000624166 RIPOR2Q9Y4F9 1068 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
ATRX-214ENST00000624166 H7C1W4 665 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 KCNK3O14649 394 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 NEBLO76041 1014 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 IL2RBP14784 551 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 ST3GAL1Q11201 340 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 P2RX5Q93086 422 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 CDC42BPGQ6DT37 1551 aa13.06□□□□□ -0.32
ATRX-214ENST00000624166 BUB1O43683 1085 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms