RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 MAMDC4Q6UXC1 1216 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 CERS3Q8IU89 383 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 SLC43A3Q8NBI5 491 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 HLA-CQ95604 372 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 VWCEQ96DN2 955 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 KCNH6Q9H252 994 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 CNPY2Q9Y2B0 182 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 SLC4A7Q9Y6M7 1214 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 MYH7P12883 1935 aa8.85□□□□□ -0.99
LINC00963-218ENST00000624138 GREB1LQ9C091 1923 aaPredicted RBP8.85□□□□□ -0.99
LINC00963-218ENST00000624138 CTAGE5O15320 804 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 ADCY6O43306 1168 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 FLOT1O75955 427 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 USP5P45974 858 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 NHLH1Q02575 133 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 KCTD2Q14681 263 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 SIAH1Q8IUQ4 282 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 RPUSD2Q8IZ73 545 aaKnown RBP8.84□□□□□ -0.99
LINC00963-218ENST00000624138 VTI1AQ96AJ9 217 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 ZNF512BQ96KM6 892 aaPredicted RBP8.84□□□□□ -0.99
LINC00963-218ENST00000624138 MEIS3Q99687 375 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
LINC00963-218ENST00000624138 UMODL1Q5DID0 1318 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 EPOPA6NHQ4 379 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 WDR46O15213 610 aaKnown RBP8.83□□□□□ -1
LINC00963-218ENST00000624138 C6orf222P0C671 652 aaPredicted RBP8.83□□□□□ -1
LINC00963-218ENST00000624138 CYP7A1P22680 504 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 COPB2P35606 906 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 STAT3P40763 770 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 ZAP70P43403 619 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 TMEM67Q5HYA8 995 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 KRT40Q6A162 431 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 ZNF467Q7Z7K2 595 aaPredicted RBP8.83□□□□□ -1
LINC00963-218ENST00000624138 REPS2Q8NFH8 660 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 NOC4LQ9BVI4 516 aaKnown RBP8.83□□□□□ -1
LINC00963-218ENST00000624138 SEZ6LQ9BYH1 1024 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 HIPK3Q9H422 1215 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 PIH1D3Q9NQM4 214 aaKnown RBP8.83□□□□□ -1
LINC00963-218ENST00000624138 ZNF214Q9UL59 606 aaPredicted RBP8.83□□□□□ -1
LINC00963-218ENST00000624138 TMX2Q9Y320 296 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 LCTP09848 1927 aa8.83□□□□□ -1
LINC00963-218ENST00000624138 SCN10AQ9Y5Y9 1956 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 ATG2AQ2TAZ0 1938 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 VWA5AO00534 786 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 ATP2A2P16615 1042 aaKnown RBP8.82□□□□□ -1
LINC00963-218ENST00000624138 CCL23P55773 120 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 G3BP1Q13283 466 aaKnown RBP eCLIP8.82□□□□□ -1
LINC00963-218ENST00000624138 ACVR2BQ13705 512 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 GNASQ5JWF2 1037 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 CCDC158Q5M9N0 1113 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 TMEM179Q6ZVK1 233 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 MIGA1Q8NAN2 632 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 AGBL1Q96MI9 1066 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 WNT8AQ9H1J5 351 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 ABHD16BQ9H3Z7 469 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 VCPKMTQ9H867 229 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 SPC25Q9HBM1 224 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 MRS2Q9HD23 443 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 NLRC5Q86WI3 1866 aa8.82□□□□□ -1
LINC00963-218ENST00000624138 GRIN2DO15399 1336 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 USP34Q70CQ2 3546 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 MPHOSPH10O00566 681 aaKnown RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 LPXNO60711 386 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 CABYRO75952 493 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 POLR3DP05423 398 aaPredicted RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 CA3P07451 260 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 PFKMP08237 780 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 GNAI3P08754 354 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 TAP1Q03518 808 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 TMED8Q6PL24 325 aaPredicted RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -13e-6■■■□□ 16.7
LINC00963-218ENST00000624138 FAM178BQ8IXR5 827 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 SPICE1Q8N0Z3 855 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 FBXL18Q96ME1 805 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 DBNDD2Q9BQY9 259 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 RIOK1Q9BRS2 568 aaKnown RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 SH2D4AQ9H788 454 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 CERS4Q9HA82 394 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 FBXO28Q9NVF7 368 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 LMCD1Q9NZU5 365 aa8.81□□□□□ -1
LINC00963-218ENST00000624138 ZHX1Q9UKY1 873 aaPredicted RBP8.81□□□□□ -1
LINC00963-218ENST00000624138 TRIOO75962 3097 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 ALADP13716 330 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 KCNA4P22459 653 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 EVX2Q03828 476 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 GRB10Q13322 594 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 ITGA7Q13683 1181 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 TTLL4Q14679 1199 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 TNNI3KQ59H18 835 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 GJD3Q8N144 294 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 PHOSPHO2Q8TCD6 241 aa8.8□□□□□ -1
LINC00963-218ENST00000624138 DDX11Q96FC9 970 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms