RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 TBC1D22AQ8WUA7 517 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 EYA3Q99504 573 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 BLZF1Q9H2G9 400 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 CGNQ9P2M7 1197 aaKnown RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 CDK5RAP2Q96SN8 1893 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 FLT1P17948 1338 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 KLRF2D3W0D1 207 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 ADKP55263 362 aaKnown RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 TBC1D16Q8TBP0 767 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 MTRQ99707 1265 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 SPZ1Q9BXG8 430 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 PPP2R2CQ9Y2T4 447 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 SNED1Q8TER0 1413 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 GAKO14976 1311 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 GOLGA6L9A6NEM1 432 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 LAD1O00515 517 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 PARP1P09874 1014 aaKnown RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 STAT6P42226 847 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 RHBDL3P58872 404 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 FILIP1LQ4L180 1135 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 RRAGBQ5VZM2 374 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 TRIM65Q6PJ69 517 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 CCDC12Q8WUD4 166 aaPredicted RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 CRAMP1Q96RY5 1269 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 ADD3Q9UEY8 706 aaKnown RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 POLLQ9UGP5 575 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 RWDD2AQ9UIY3 292 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 CTNND2Q9UQB3 1225 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 AKR1B15C9JRZ8 316 aaPredicted RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 TEX33O43247 280 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 RPN1P04843 607 aaKnown RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 GOLGA8HP0CJ92 632 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 INF2Q27J81 1249 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 CCDC93Q567U6 631 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 ZNF658Q5TYW1 1059 aaPredicted RBP9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 PANX2Q96RD6 677 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
SND1-IT1-201ENST00000623342 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 CDC25AP30304 524 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 PBX1P40424 430 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 PRPHP41219 470 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 PAK1Q13153 545 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 KARSQ15046 597 aaKnown RBP9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 IGSF22Q8N9C0 903 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 ZMYND12Q9H0C1 365 aa9.4□□□□□ -0.9
SND1-IT1-201ENST00000623342 C6orf229H3BNL8 230 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 UBA7P41226 1012 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 NAPAP54920 295 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 MAPK8IP2Q13387 824 aaPredicted RBP9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 KRT25Q7Z3Z0 450 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 TMC4Q7Z404 712 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 RASSF8Q8NHQ8 419 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 RRP36Q96EU6 259 aaKnown RBP9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 CEP95Q96GE4 821 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 CCSER1Q9C0I3 900 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 TMEM60Q9H2L4 133 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 C6orf50Q9HD87 102 aa9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 LIMA1Q9UHB6 759 aaKnown RBP9.4□□□□□ -0.91
SND1-IT1-201ENST00000623342 KLRG2A4D1S0 409 aaPredicted RBP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 MYL1P05976 194 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 GNA11P29992 359 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 NOVP48745 357 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 SPAG1Q07617 926 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 DDR1Q08345 913 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 RBL2Q08999 1139 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 USP17L2Q6R6M4 530 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 TOGARAM2Q6ZUX3 1019 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 NELFBQ8WX92 580 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 FEZ1Q99689 392 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 NAA15Q9BXJ9 866 aaKnown RBP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 SEC63Q9UGP8 760 aaKnown RBP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 V9GYY5 206 aaPredicted RBP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 MYH1P12882 1939 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 ITIH6Q6UXX5 1313 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 SMCO2A6NFE2 343 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 LRRC10BA6NIK2 292 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 POLRMTO00411 1230 aaKnown RBP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 NONOQ15233 471 aaKnown RBP eCLIP9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 KRT31Q15323 416 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 NAALADL2Q58DX5 795 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 RASGRP2Q7LDG7 609 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 ANKRD20A12PQ8NF67 263 aa9.39□□□□□ -0.91
SND1-IT1-201ENST00000623342 ZNF397Q8NF99 534 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms