RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 SPATC1Q76KD6 591 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 NOP9Q86U38 636 aaKnown RBP5.75□□□□□ -1.49
ATRX-209ENST00000623242 JAZF1Q86VZ6 243 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 ZDHHC13Q8IUH4 622 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 CCDC144CPQ8IYA2 1237 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 C7orf61Q8IZ16 206 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 DTWD2Q8NBA8 298 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 SMARCC1Q92922 1105 aaPredicted RBP5.75□□□□□ -1.49
ATRX-209ENST00000623242 FGD4Q96M96 766 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 DNAJC7Q99615 494 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 PRDM14Q9GZV8 571 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 APEX2Q9UBZ4 518 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 CAPN6Q9Y6Q1 641 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 TIAM1Q13009 1591 aa5.75□□□□□ -1.49
ATRX-209ENST00000623242 ASXL2Q76L83 1435 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 KDM5BQ9UGL1 1544 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 DIAPH1O60610 1272 aaKnown RBP5.74□□□□□ -1.49
ATRX-209ENST00000623242 CD247P20963 164 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 CYP7A1P22680 504 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 CYP27A1Q02318 531 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 TNK2Q07912 1038 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 FAM50AQ14320 339 aaKnown RBP5.74□□□□□ -1.49
ATRX-209ENST00000623242 NKPD1Q17RQ9 610 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 TMC3Q7Z5M5 1100 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 LILRB2Q8N423 598 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 MRFAP1L1Q96HT8 127 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 LGR4Q9BXB1 951 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 KANSL2Q9H9L4 492 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 GP6Q9HCN6 339 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 GTF2IRD1Q9UHL9 959 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 ZMYM5Q9UJ78 669 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 MINPP1Q9UNW1 487 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 PLAGL2Q9UPG8 496 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 TBX22Q9Y458 520 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 CCNB3Q8WWL7 1395 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 ZCCHC11Q5TAX3 1644 aaKnown RBP5.74□□□□□ -1.49
ATRX-209ENST00000623242 EHBP1L1Q8N3D4 1523 aa5.74□□□□□ -1.49
ATRX-209ENST00000623242 TROQ12816 1431 aaPredicted RBP5.74□□□□□ -1.49
ATRX-209ENST00000623242 LRRC9Q6ZRR7 1453 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 WDR7Q9Y4E6 1490 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 SHISA3A0PJX4 238 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 KIR3DL1P43629 444 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 CHMP4BP1P59074 171 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 DUSP27Q5VZP5 1158 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 HEATR6Q6AI08 1181 aaKnown RBP5.73□□□□□ -1.49
ATRX-209ENST00000623242 EEPD1Q7L9B9 569 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 NLGN1Q8N2Q7 840 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 ST13P5Q8NFI4 369 aaPredicted RBP5.73□□□□□ -1.49
ATRX-209ENST00000623242 OSBPL1AQ9BXW6 950 aa5.73□□□□□ -1.49
ATRX-209ENST00000623242 CFDP1Q9UEE9 299 aaPredicted RBP5.73□□□□□ -1.49
ATRX-209ENST00000623242 ANKRD34BA5PLL1 514 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 GSC2O15499 205 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 SRFP11831 508 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 ITIH2P19823 946 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 HOXA10P31260 410 aaPredicted RBP5.72□□□□□ -1.49
ATRX-209ENST00000623242 ZNF445P59923 1031 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 MTERF2Q49AM1 385 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 NBPF11Q86T75 865 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 SPACA3Q8IXA5 215 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 MFSD4AQ8N468 514 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 COX4I2Q96KJ9 171 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 RNPC3Q96LT9 517 aaKnown RBP5.72□□□□□ -1.49
ATRX-209ENST00000623242 DUSP15Q9H1R2 295 aaPredicted RBP5.72□□□□□ -1.49
ATRX-209ENST00000623242 LRRC4CQ9HCJ2 640 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 ZFP64Q9NPA5 681 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 ATG3Q9NT62 314 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 PFDN2Q9UHV9 154 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 ST14Q9Y5Y6 855 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 MRPL42Q9Y6G3 142 aaKnown RBP5.72□□□□□ -1.49
ATRX-209ENST00000623242 KIF14Q15058 1648 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 MAP3K1Q13233 1512 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 CFAP43Q8NDM7 1665 aa5.72□□□□□ -1.49
ATRX-209ENST00000623242 WASH4PA8MWX3 477 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 SMARCA5O60264 1052 aaPredicted RBP5.71□□□□□ -1.5
ATRX-209ENST00000623242 CAPNS1P04632 268 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 ZNF143P52747 638 aaPredicted RBP5.71□□□□□ -1.5
ATRX-209ENST00000623242 PLD6Q8N2A8 252 aaKnown RBP5.71□□□□□ -1.5
ATRX-209ENST00000623242 JMYQ8N9B5 988 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 ADCY4Q8NFM4 1077 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 BRF1Q92994 677 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 APBA2Q99767 749 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 METTL22Q9BUU2 404 aaPredicted RBP5.71□□□□□ -1.5
ATRX-209ENST00000623242 GFOD1Q9NXC2 390 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 FBXL21Q9UKT6 434 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 PCDHB12Q9Y5F1 795 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 NCOA2Q15596 1464 aa5.71□□□□□ -1.5
ATRX-209ENST00000623242 A0A1W2PQU0 124 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 TLDC2A0PJX2 215 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 GNAT3A8MTJ3 354 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 TBX1O43435 398 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 ADCY3O60266 1144 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 PRAMEF1O95521 474 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 TGFB1P01137 390 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 CEACAM5P06731 702 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 CTSKP43235 329 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 IFRD2Q12894 506 aaPredicted RBP5.7□□□□□ -1.5
ATRX-209ENST00000623242 NMIQ13287 307 aaPredicted RBP5.7□□□□□ -1.5
ATRX-209ENST00000623242 TCEAL1Q15170 157 aa5.7□□□□□ -1.5
ATRX-209ENST00000623242 CPSF6Q16630 551 aaKnown RBP eCLIP5.7□□□□□ -1.55e-6■■□□□ 12.1
ATRX-209ENST00000623242 EFCAB2Q5VUJ9 269 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms