RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 HIRAP54198 1017 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 JAG1P78504 1218 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 ZNF543Q08ER8 600 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 CCDC96Q2M329 555 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 KLHL40Q2TBA0 621 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SLFN13Q68D06 897 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SPATA32Q96LK8 384 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 BRMS1Q9HCU9 246 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 GGA3Q9NZ52 723 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 VPS54Q9P1Q0 977 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 KCNJ14Q9UNX9 436 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 DDX49Q9Y6V7 483 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 MYH6P13533 1939 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 ELP1O95163 1332 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 PITPNM2Q9BZ72 1349 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 GOLGB1Q14789 3259 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 KIF28PB7ZC32 967 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 GTPBP6O43824 516 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 ASNSP08243 561 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 CALML3P27482 149 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SLC1A4P43007 532 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SLC35G1Q2M3R5 365 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 MYSM1Q5VVJ2 828 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 NOSTRINQ8IVI9 506 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 DIS3L2Q8IYB7 885 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 LEO1Q8WVC0 666 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 PIBF1Q8WXW3 757 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 GMCL1Q96IK5 515 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 PHF20Q9BVI0 1012 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 RIOX1Q9H6W3 641 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SH2D4AQ9H788 454 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 GPCPD1Q9NPB8 672 aa8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SEC63Q9UGP8 760 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 SCAF8Q9UPN6 1271 aaKnown RBP8.06□□□□□ -1.12
CBWD3-219ENST00000622817 FRMPD2Q68DX3 1309 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-219ENST00000622817 TCHHQ07283 1943 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 MYH4Q9Y623 1939 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 BAZ2BQ9UIF8 2168 aaKnown RBP8.05□□□□□ -1.12
CBWD3-219ENST00000622817 BTBD18B2RXH4 712 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 F5H6K3 240 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 hCG_1984214I3L0E3 225 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 RAD21O60216 631 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 CTNND1O60716 968 aaKnown RBP8.05□□□□□ -1.12
CBWD3-219ENST00000622817 KRT2P35908 639 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 UBE2HP62256 183 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 KLRC3Q07444 240 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 SUPT20HL1Q3ZLR7 823 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 NBPF12Q5TAG4 269 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-219ENST00000622817 GALNT17Q6IS24 598 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 RASGRP2Q7LDG7 609 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 ZNF713Q8N859 430 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-219ENST00000622817 CCDC148Q8NFR7 591 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 CCDC12Q8WUD4 166 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-219ENST00000622817 ZNF341Q9BYN7 854 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 UBA5Q9GZZ9 404 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 RTEL1Q9NZ71 1219 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 RCOR1Q9UKL0 485 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 TMX2Q9Y320 296 aa8.05□□□□□ -1.12
CBWD3-219ENST00000622817 NDUFB10O96000 172 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 NLRP5P59047 1200 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 WWC2Q6AWC2 1192 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 HEATR3Q7Z4Q2 680 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 DCPSQ96C86 337 aaKnown RBP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 USP28Q96RU2 1077 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 PIGSQ96S52 555 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 CPVLQ9H3G5 476 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 VAT1LQ9HCJ6 419 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 BARHL2Q9NY43 387 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 ISY1Q9ULR0 285 aaKnown RBP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 PNMA6FA0A0J9YX94 578 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 A0A1W2PRG0 241 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 GOLGA6L4A6NEF3 574 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 GLTPD2A6NH11 291 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 STXBP3O00186 592 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 GADD45BO75293 160 aaPredicted RBP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 YEATS4O95619 227 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 BMP3P12645 472 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 NASPP49321 788 aaPredicted RBP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 CEBPZQ03701 1054 aaKnown RBP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 ANO1Q5XXA6 986 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 TTBK2Q6IQ55 1244 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 USP50Q70EL3 339 aaPredicted RBP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 KCTD1Q719H9 257 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 HOMER1Q86YM7 354 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 SULF1Q8IWU6 871 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 ADGRF4Q8IZF3 695 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 GPT2Q8TD30 523 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 ACER1Q8TDN7 264 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
CBWD3-219ENST00000622817 SHISA4Q96DD7 197 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 JMJD4Q9H9V9 463 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 ZNF112Q9UJU3 913 aa8.04□□□□□ -1.12
CBWD3-219ENST00000622817 IQCA1LA6NCM1 817 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms