RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SPTLC2O15270 562 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 BMS1Q14692 1282 aaKnown RBP10.24□□□□□ -0.77
HDAC9-229ENST00000622668 GIMAP6Q6P9H5 292 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 SCYL3Q8IZE3 742 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 KCNG4Q8TDN1 519 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 FEM1BQ9UK73 627 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 MARK3P27448 753 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 CACNA2D4Q7Z3S7 1137 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 BLIDQ8IZY5 108 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 VPS33BQ9H267 617 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 ACAD9Q9H845 621 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 LRFN2Q9ULH4 789 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 MANSC4A6NHS7 340 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-229ENST00000622668 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-229ENST00000622668 FAM160B1Q5W0V3 765 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 DGKHQ86XP1 1220 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 CDHR1Q96JP9 859 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 HSPA4P34932 840 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 ANO1Q5XXA6 986 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 TTC14Q96N46 770 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 TEX13BQ9BXU2 312 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 TAF1DQ9H5J8 278 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-229ENST00000622668 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-229ENST00000622668 PCDHA12Q9UN75 941 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 DNM3Q9UQ16 869 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 AKT3Q9Y243 479 aa10.24□□□□□ -0.77
HDAC9-229ENST00000622668 NEMFO60524 1076 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 JAK2O60674 1132 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 NFKBIBQ15653 356 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 DACT2Q5SW24 774 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 FKBP15Q5T1M5 1219 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 MOB2Q70IA6 237 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 TRPM4Q8TD43 1214 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 RASGRP4Q8TDF6 673 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 TRIM47Q96LD4 638 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 ZDHHC15Q96MV8 337 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 PPP1R16BQ96T49 567 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 ZNF215Q9UL58 517 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-229ENST00000622668 KBTBD13C9JR72 458 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 BIRC3Q13489 604 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 MAP3K11Q16584 847 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 CCDC181Q5TID7 509 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 RCSD1Q6JBY9 416 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 RGMBQ6NW40 437 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 APOA5Q6Q788 366 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 DEPTORQ8TB45 409 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 MAP4K1Q92918 833 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 A0A0U1RQG5 324 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-229ENST00000622668 TRAK2O60296 914 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 LETM1O95202 739 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-229ENST00000622668 ZSCAN22P10073 491 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-229ENST00000622668 CCND2P30279 289 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 STXBP2Q15833 593 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 C12orf60Q5U649 245 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 MCTP2Q6DN12 878 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 CYP4F22Q6NT55 531 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 MICAL1Q8TDZ2 1067 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 APOL6Q9BWW8 343 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 TEKT3Q9BXF9 490 aa10.23□□□□□ -0.77
HDAC9-229ENST00000622668 GSG1L2A8MUP6 293 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 PLCD1P51178 756 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 POLGP54098 1239 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-229ENST00000622668 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 PODXL2Q9NZ53 605 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 WTIPA6NIX2 430 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-229ENST00000622668 TOMM70O94826 608 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 ERLIN2O94905 339 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 SLC9C1Q4G0N8 1177 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 BRAPQ7Z569 592 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 PI4K2BQ8TCG2 481 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 LPAR1Q92633 364 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 FNBP1Q96RU3 617 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 ZNF577Q9BSK1 485 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 PALM3A6NDB9 673 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-229ENST00000622668 NR1I2O75469 434 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 IQUBQ8NA54 791 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
HDAC9-229ENST00000622668 DCAF4Q8WV16 495 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 LRP6O75581 1613 aa10.22□□□□□ -0.77
HDAC9-229ENST00000622668 LRRIQ4A6NIV6 560 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 NDUFB10O96000 172 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 UBE2SQ16763 222 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 PDXDC2PQ6P474 469 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 SV2BQ7L1I2 683 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 NEK8Q86SG6 692 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 ADPGKQ9BRR6 497 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 SEPT9Q9UHD8 586 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-229ENST00000622668 DYNC1LI2O43237 492 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-229ENST00000622668 ZBTB8OSQ8IWT0 167 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 PPP2R3BQ9Y5P8 575 aa10.21□□□□□ -0.77
HDAC9-229ENST00000622668 WDR46O15213 610 aaKnown RBP10.21□□□□□ -0.78
HDAC9-229ENST00000622668 SEC24BO95487 1268 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms