RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 CCDC40Q4G0X9 1142 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 LRCH2Q5VUJ6 765 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 PAGE5Q96GU1 130 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 CTAGE1Q96RT6 745 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 SH3GL2Q99962 352 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 KDM3BQ7LBC6 1761 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 ZAP70P43403 619 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 GUCY2FP51841 1108 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 SAFBQ15424 915 aaKnown RBP eCLIP24.29■■□□□ 1.484e-6■■■□□ 14.6
PCSK6-220ENST00000622483 SPRED3Q2MJR0 410 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 CCDC13Q8IYE1 715 aa24.29■■□□□ 1.48
PCSK6-220ENST00000622483 AENQ8WTP8 325 aaKnown RBP24.29■■□□□ 1.48
PCSK6-220ENST00000622483 PSMD14O00487 310 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 KLK7P49862 253 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 IQCA1Q86XH1 822 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 IFT81Q8WYA0 676 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 ZIM3Q96PE6 472 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 MYO1AQ9UBC5 1043 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 CHUKO15111 745 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 SSRP1Q08945 709 aaKnown RBP24.28■■□□□ 1.48
PCSK6-220ENST00000622483 TMEM67Q5HYA8 995 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 SYMPKQ92797 1274 aaKnown RBP24.28■■□□□ 1.48
PCSK6-220ENST00000622483 ABCA3Q99758 1704 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 CDKL5O76039 1030 aa24.28■■□□□ 1.48
PCSK6-220ENST00000622483 FAM217BQ9NTX9 383 aaPredicted RBP24.28■■□□□ 1.48
PCSK6-220ENST00000622483 KCNJ18B7U540 433 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 LSP1P33241 339 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 RNASE9P60153 205 aaKnown RBP24.27■■□□□ 1.48
PCSK6-220ENST00000622483 KCNJ12Q14500 433 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 B4GALNT4Q76KP1 1039 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 ANKRD13CQ8N6S4 541 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 NUP133Q8WUM0 1156 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 AGPAT5Q9NUQ2 364 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 MCM8Q9UJA3 840 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 SPATA31A5Q5VU36 1347 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 SPATA31A7Q8IWB4 1347 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 E7EVH7 732 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 WNT7AO00755 349 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 HSF2BPO75031 334 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 NTRK3Q16288 839 aa24.27■■□□□ 1.48
PCSK6-220ENST00000622483 CDR1P51861 262 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 SATB1Q01826 763 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 TTF1Q15361 905 aaPredicted RBP24.26■■□□□ 1.47
PCSK6-220ENST00000622483 CCDC114Q96M63 670 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 HAUS4Q9H6D7 363 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 GDAQ9Y2T3 454 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 OPLAHO14841 1288 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 PCMTD1Q96MG8 357 aaPredicted RBP24.26■■□□□ 1.47
PCSK6-220ENST00000622483 CCDC43Q96MW1 224 aaKnown RBP24.26■■□□□ 1.47
PCSK6-220ENST00000622483 SLC40A1Q9NP59 571 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 LUC7L2Q9Y383 392 aaKnown RBP24.26■■□□□ 1.47
PCSK6-220ENST00000622483 SCN11AQ9UI33 1791 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 NCK2O43639 380 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 NFRKBQ6P4R8 1299 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 CCDC24Q8N4L8 307 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 TRIML1Q8N9V2 468 aa24.26■■□□□ 1.47
PCSK6-220ENST00000622483 ZNF473Q8WTR7 871 aaKnown RBP24.26■■□□□ 1.47
PCSK6-220ENST00000622483 C5P01031 1676 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 GOLGA8KD6RF30 607 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 SH2B2O14492 632 aaPredicted RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 FAM153BP0C7A2 387 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 BRD2P25440 801 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 CLNS1AP54105 237 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 NAP1L1P55209 391 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 CKAP4Q07065 602 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 TSR1Q2NL82 804 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 FAM153CQ494X1 144 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 TBC1D31Q96DN5 1066 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 CCDC51Q96ER9 411 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 MLXIPQ9HAP2 919 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 DDX20Q9UHI6 824 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 FAM153AQ9UHL3 310 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 TARSL2A2RTX5 802 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 NAA25Q14CX7 972 aa24.25■■□□□ 1.47
PCSK6-220ENST00000622483 EARS2Q5JPH6 523 aaKnown RBP24.25■■□□□ 1.47
PCSK6-220ENST00000622483 ERCC3P19447 782 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 CDC25CP30307 473 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 CTDSPL2Q05D32 466 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 CCDC70Q6NSX1 233 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 WDR59Q6PJI9 974 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 BICDL1Q6ZP65 573 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 OR8K1Q8NGG5 319 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 HAUS2Q9NVX0 235 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 OPA1O60313 960 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 STARD3NLO95772 234 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 PAPD7Q5XG87 772 aaKnown RBP24.24■■□□□ 1.47
PCSK6-220ENST00000622483 SLC12A7Q9Y666 1083 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 RFX7Q2KHR2 1363 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 IFIT3O14879 490 aaKnown RBP24.24■■□□□ 1.47
PCSK6-220ENST00000622483 FSBPO95073 299 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 MMP1P03956 469 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 PLEKP08567 350 aaPredicted RBP24.24■■□□□ 1.47
PCSK6-220ENST00000622483 ZNF174Q15697 407 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 PLBD2Q8NHP8 589 aa24.24■■□□□ 1.47
PCSK6-220ENST00000622483 PRDM1O75626 825 aa24.23■■□□□ 1.47
PCSK6-220ENST00000622483 CCDC96Q2M329 555 aa24.23■■□□□ 1.47
PCSK6-220ENST00000622483 NELFBQ8WX92 580 aa24.23■■□□□ 1.47
PCSK6-220ENST00000622483 CCT8L2Q96SF2 557 aa24.23■■□□□ 1.47
PCSK6-220ENST00000622483 NFU1Q9UMS0 254 aa24.23■■□□□ 1.47
PCSK6-220ENST00000622483 KRT86O43790 486 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms