RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 UBE2Q2LH0YL09 131 aa13.73□□□□□ -0.21
SPCS1-206ENST00000619898 ATP2C2O75185 946 aa13.73□□□□□ -0.21
SPCS1-206ENST00000619898 GRIN1Q05586 938 aa13.73□□□□□ -0.21
SPCS1-206ENST00000619898 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
SPCS1-206ENST00000619898 GOLGA6L7A0A1B0GV03 622 aa13.73□□□□□ -0.21
SPCS1-206ENST00000619898 LONP1P36776 959 aaKnown RBP13.73□□□□□ -0.21
SPCS1-206ENST00000619898 ZNF658Q5TYW1 1059 aaPredicted RBP13.73□□□□□ -0.21
SPCS1-206ENST00000619898 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
SPCS1-206ENST00000619898 RWDD2AQ9UIY3 292 aa13.73□□□□□ -0.21
SPCS1-206ENST00000619898 RNF40O75150 1001 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 DDAH1O94760 285 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PNMA1Q8ND90 353 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 RIPOR2Q9Y4F9 1068 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 GSG1L2A8MUP6 293 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
SPCS1-206ENST00000619898 ST5P78524 1137 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PPARDQ03181 441 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 TRIM58Q8NG06 486 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PIGBQ92521 554 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 NOX5Q96PH1 765 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 PTPAQ15257 358 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
SPCS1-206ENST00000619898 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 LRWD1Q9UFC0 647 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 FHOD1Q9Y613 1164 aa13.72□□□□□ -0.21
SPCS1-206ENST00000619898 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 CUL4BQ13620 913 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 ALX1Q15699 326 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 TCP11X2Q5H9J9 407 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 ABHD10Q9NUJ1 306 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 COL15A1P39059 1388 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 TRAPPC10P48553 1259 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 CCDC84Q86UT8 332 aaPredicted RBP13.71□□□□□ -0.21
SPCS1-206ENST00000619898 SELENOOQ9BVL4 669 aa13.71□□□□□ -0.21
SPCS1-206ENST00000619898 CYP27A1Q02318 531 aa13.71□□□□□ -0.22
SPCS1-206ENST00000619898 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.71□□□□□ -0.22
SPCS1-206ENST00000619898 SLIT1O75093 1534 aa13.71□□□□□ -0.22
SPCS1-206ENST00000619898 SEMA3EO15041 775 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 EEF1GP26641 437 aaKnown RBP13.7□□□□□ -0.22
SPCS1-206ENST00000619898 TNNC1P63316 161 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 IPO4Q8TEX9 1081 aaKnown RBP13.7□□□□□ -0.22
SPCS1-206ENST00000619898 CNOT6LQ96LI5 555 aaKnown RBP13.7□□□□□ -0.22
SPCS1-206ENST00000619898 A0A1B0GTH6 734 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
SPCS1-206ENST00000619898 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 HPSEQ9Y251 543 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 SALL1Q9NSC2 1324 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 TECP42680 631 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 SLC9C1Q4G0N8 1177 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 ABCC12Q96J65 1359 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 GOLGA8HP0CJ92 632 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
SPCS1-206ENST00000619898 PICALMQ13492 652 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 DYDC1Q8WWB3 177 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 ANKRD2Q9GZV1 360 aa13.7□□□□□ -0.22
SPCS1-206ENST00000619898 TRIM49BA6NDI0 452 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 ANKRD65E5RJM6 399 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 MYO1CO00159 1063 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 NR1I3Q14994 352 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
SPCS1-206ENST00000619898 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 C3P01024 1663 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 INPP5BP32019 993 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 GNGT1P63211 74 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 BCAS4Q8TDM0 211 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
SPCS1-206ENST00000619898 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
SPCS1-206ENST00000619898 FXR1P51114 621 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPCS1-206ENST00000619898 CFAP221Q4G0U5 840 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 ENAHQ8N8S7 591 aaPredicted RBP13.69□□□□□ -0.22
SPCS1-206ENST00000619898 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
SPCS1-206ENST00000619898 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 BUB1O43683 1085 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 VSNL1P62760 191 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 KLHL7Q8IXQ5 586 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 OR52Z1P0C646 297 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 CASP7P55210 303 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
SPCS1-206ENST00000619898 MAPKAPK5Q8IW41 473 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
SPCS1-206ENST00000619898 TBC1D8O95759 1140 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms