RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 CCDC17Q96LX7 622 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 PFKFB2O60825 505 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 FAM178BQ8IXR5 827 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 C1orf112Q9NSG2 853 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 PANK4Q9NVE7 773 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 FEZ2Q9UHY8 353 aaPredicted RBP22.29■■□□□ 1.16
FGFR1-241ENST00000619564 FOSP01100 380 aaPredicted RBP22.29■■□□□ 1.16
FGFR1-241ENST00000619564 U2AF1L4Q8WU68 220 aaKnown RBP22.29■■□□□ 1.16
FGFR1-241ENST00000619564 LARSQ9P2J5 1176 aaKnown RBP22.29■■□□□ 1.16
FGFR1-241ENST00000619564 FAM135BQ49AJ0 1406 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 PFKFB1P16118 471 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 RUFY4Q6ZNE9 571 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 PPFIBP2Q8ND30 876 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 AFG3L2Q9Y4W6 797 aa22.29■■□□□ 1.16
FGFR1-241ENST00000619564 POLA2Q14181 598 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 GPKOWQ92917 476 aaPredicted RBP eCLIP22.28■■□□□ 1.16
FGFR1-241ENST00000619564 MMS19Q96T76 1030 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 FGAP02671 866 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 KCTD2Q14681 263 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 ZNF772Q68DY9 489 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-241ENST00000619564 THRAP3Q9Y2W1 955 aaKnown RBP22.28■■□□□ 1.16
FGFR1-241ENST00000619564 COL4A3BPQ9Y5P4 624 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 MYOM2P54296 1465 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 CCNA1P78396 465 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 PAK2Q13177 524 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 DMP1Q13316 513 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-241ENST00000619564 AFAP1L1Q8TED9 768 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 CAPN9O14815 690 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 GADD45BO75293 160 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-241ENST00000619564 SLC12A2P55011 1212 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 PTH1RQ03431 593 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 HHATQ5VTY9 493 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 CCDC51Q96ER9 411 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 ARMCX3Q9UH62 379 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-241ENST00000619564 AMFRQ9UKV5 643 aa22.28■■□□□ 1.16
FGFR1-241ENST00000619564 POLGP54098 1239 aaPredicted RBP22.27■■□□□ 1.16
FGFR1-241ENST00000619564 CIAO1O76071 339 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 PSMB7Q99436 277 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 NBPF3Q9H094 633 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 PCDHA1Q9Y5I3 950 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 GOLGA6CA6NDK9 693 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 GOLGA6BA6NDN3 693 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 KCNJ18B7U540 433 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 GOLGA6DP0CG33 693 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 ADD1P35611 737 aaKnown RBP22.27■■□□□ 1.16
FGFR1-241ENST00000619564 PHKA1P46020 1223 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 KCNJ12Q14500 433 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 ARHGEF6Q15052 776 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 CARD6Q9BX69 1037 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 GOLGA6AQ9NYA3 693 aa22.27■■□□□ 1.16
FGFR1-241ENST00000619564 KIF11P52732 1056 aa22.27■■□□□ 1.15
FGFR1-241ENST00000619564 KRT81Q14533 505 aa22.27■■□□□ 1.15
FGFR1-241ENST00000619564 ZHX1Q9UKY1 873 aaPredicted RBP22.27■■□□□ 1.15
FGFR1-241ENST00000619564 ASAP1Q9ULH1 1129 aa22.27■■□□□ 1.15
FGFR1-241ENST00000619564 DTNBO60941 627 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 PPP2R5CQ13362 524 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 CEP57Q86XR8 500 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 MIS12Q9H081 205 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 HESX1Q9UBX0 185 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 GBP6Q6ZN66 633 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 SND1Q7KZF4 910 aaKnown RBP eCLIP22.26■■□□□ 1.15
FGFR1-241ENST00000619564 ATP10DQ9P241 1426 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 TRIM37O94972 964 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 SERPINB2P05120 415 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 TRIM50Q86XT4 487 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 GPATCH11Q8N954 259 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 RAB20Q9NX57 234 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 TMEM191BP0C7N4 346 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 MORC3Q14149 939 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 COPRSQ9NQ92 184 aa22.26■■□□□ 1.15
FGFR1-241ENST00000619564 STAM2O75886 525 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 MTMR3Q13615 1198 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 HADHQ16836 314 aaKnown RBP22.25■■□□□ 1.15
FGFR1-241ENST00000619564 CSRNP1Q96S65 589 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 AMNQ9BXJ7 453 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 RXRBP28702 533 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 LONRF2Q1L5Z9 754 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 RSAD2Q8WXG1 361 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 PARP2Q9UGN5 583 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 ARMCX5Q6P1M9 558 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 RTEL1Q9NZ71 1219 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 I3L4J1 428 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 ABL1P00519 1130 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 KRT15P19012 456 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 USP14P54578 494 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
FGFR1-241ENST00000619564 DPP9Q86TI2 863 aa22.25■■□□□ 1.15
FGFR1-241ENST00000619564 LRRIQ4A6NIV6 560 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 SCYL2Q6P3W7 929 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 KDM5AP29375 1690 aaKnown RBP22.24■■□□□ 1.15
FGFR1-241ENST00000619564 GPR108Q9NPR9 543 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 CLRN2A0PK11 232 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 OATP04181 439 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 SARNPP82979 210 aaKnown RBP22.24■■□□□ 1.15
FGFR1-241ENST00000619564 TFDP1Q14186 410 aa22.24■■□□□ 1.15
FGFR1-241ENST00000619564 SDCCAG8Q86SQ7 713 aaPredicted RBP22.24■■□□□ 1.15
FGFR1-241ENST00000619564 RAB17Q9H0T7 212 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms