RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 IRX2Q9BZI1 471 aaPredicted RBP33.98■■■■□ 3.03
KHSRP-213ENST00000619396 CTNND2Q9UQB3 1225 aa33.98■■■■□ 3.03
KHSRP-213ENST00000619396 ITIH6Q6UXX5 1313 aa33.98■■■■□ 3.03
KHSRP-213ENST00000619396 LRRC10BA6NIK2 292 aa33.98■■■■□ 3.03
KHSRP-213ENST00000619396 SLC44A5Q8NCS7 719 aa33.98■■■■□ 3.03
KHSRP-213ENST00000619396 BLZF1Q9H2G9 400 aa33.98■■■■□ 3.03
KHSRP-213ENST00000619396 TRIM37O94972 964 aa33.97■■■■□ 3.03
KHSRP-213ENST00000619396 DDR1Q08345 913 aa33.97■■■■□ 3.03
KHSRP-213ENST00000619396 CERKQ8TCT0 537 aa33.97■■■■□ 3.03
KHSRP-213ENST00000619396 CD209Q9NNX6 404 aa33.97■■■■□ 3.03
KHSRP-213ENST00000619396 LIMA1Q9UHB6 759 aaKnown RBP33.97■■■■□ 3.03
KHSRP-213ENST00000619396 SAP30BPQ9UHR5 308 aaKnown RBP33.97■■■■□ 3.03
KHSRP-213ENST00000619396 GTPBP6O43824 516 aaPredicted RBP33.96■■■■□ 3.03
KHSRP-213ENST00000619396 GYPCP04921 128 aa33.96■■■■□ 3.03
KHSRP-213ENST00000619396 CASP14P31944 242 aa33.96■■■■□ 3.03
KHSRP-213ENST00000619396 ST5P78524 1137 aa33.96■■■■□ 3.03
KHSRP-213ENST00000619396 RASGRP2Q7LDG7 609 aa33.96■■■■□ 3.03
KHSRP-213ENST00000619396 MAPKAPK5Q8IW41 473 aa33.96■■■■□ 3.03
KHSRP-213ENST00000619396 PYM1Q9BRP8 204 aaKnown RBP33.96■■■■□ 3.03
KHSRP-213ENST00000619396 QTRT2Q9H974 415 aaKnown RBP33.96■■■■□ 3.03
KHSRP-213ENST00000619396 ATP8B1O43520 1251 aa33.95■■■■□ 3.03
KHSRP-213ENST00000619396 CCDC12Q8WUD4 166 aaPredicted RBP33.95■■■■□ 3.03
KHSRP-213ENST00000619396 RWDD2AQ9UIY3 292 aa33.95■■■■□ 3.03
KHSRP-213ENST00000619396 A0A0U1RQJ8 604 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 USP17L3A6NCW0 530 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 USP17L4A6NCW7 530 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 MCM7P33993 719 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 FAM193AP78312 1265 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 USP17L1Q7RTZ2 530 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 C4orf32Q8N8J7 132 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 ATRIPQ8WXE1 791 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 CCDC51Q96ER9 411 aa33.95■■■■□ 3.02
KHSRP-213ENST00000619396 FXR1P51114 621 aaKnown RBP eCLIP33.94■■■■□ 3.02
KHSRP-213ENST00000619396 KRT31Q15323 416 aa33.94■■■■□ 3.02
KHSRP-213ENST00000619396 RRAGBQ5VZM2 374 aa33.94■■■■□ 3.02
KHSRP-213ENST00000619396 COBLO75128 1261 aa33.94■■■■□ 3.02
KHSRP-213ENST00000619396 SEC31AO94979 1220 aaKnown RBP33.94■■■■□ 3.02
KHSRP-213ENST00000619396 RABGGTAQ92696 567 aa33.94■■■■□ 3.02
KHSRP-213ENST00000619396 ZBTB22O15209 634 aa33.93■■■■□ 3.02
KHSRP-213ENST00000619396 CNGA4Q8IV77 575 aa33.93■■■■□ 3.02
KHSRP-213ENST00000619396 RTFDC1Q9BY42 306 aaPredicted RBP33.93■■■■□ 3.02
KHSRP-213ENST00000619396 LZTFL1Q9NQ48 299 aa33.93■■■■□ 3.02
KHSRP-213ENST00000619396 POLLQ9UGP5 575 aa33.93■■■■□ 3.02
KHSRP-213ENST00000619396 GGA1Q9UJY5 639 aa33.93■■■■□ 3.02
KHSRP-213ENST00000619396 C15orf52Q6ZUT6 534 aaKnown RBP33.92■■■■□ 3.02
KHSRP-213ENST00000619396 RBM17Q96I25 401 aaKnown RBP33.92■■■■□ 3.02
KHSRP-213ENST00000619396 TEX35Q5T0J7 233 aa33.92■■■■□ 3.02
KHSRP-213ENST00000619396 ARL6IP4Q66PJ3 421 aaKnown RBP33.92■■■■□ 3.02
KHSRP-213ENST00000619396 CC2D1AQ6P1N0 951 aaPredicted RBP33.92■■■■□ 3.02
KHSRP-213ENST00000619396 STAG2Q8N3U4 1231 aa33.92■■■■□ 3.02
KHSRP-213ENST00000619396 NAV1Q8NEY1 1877 aa33.91■■■■□ 3.02
KHSRP-213ENST00000619396 BAG3O95817 575 aa33.91■■■■□ 3.02
KHSRP-213ENST00000619396 GSTO1P78417 241 aa33.91■■■■□ 3.02
KHSRP-213ENST00000619396 KAT14Q9H8E8 782 aa33.91■■■■□ 3.02
KHSRP-213ENST00000619396 MKNK2Q9HBH9 465 aa33.91■■■■□ 3.02
KHSRP-213ENST00000619396 MTMR7Q9Y216 660 aa33.91■■■■□ 3.02
KHSRP-213ENST00000619396 ZNF658Q5TYW1 1059 aaPredicted RBP33.91■■■■□ 3.02
KHSRP-213ENST00000619396 TMED8Q6PL24 325 aaPredicted RBP33.91■■■■□ 3.02
KHSRP-213ENST00000619396 CCT6AP40227 531 aaKnown RBP33.9■■■■□ 3.02
KHSRP-213ENST00000619396 BTDP43251 543 aa33.9■■■■□ 3.02
KHSRP-213ENST00000619396 PPP4CP60510 307 aa33.9■■■■□ 3.02
KHSRP-213ENST00000619396 CDK5RAP2Q96SN8 1893 aa33.9■■■■□ 3.02
KHSRP-213ENST00000619396 PARD6BQ9BYG5 372 aa33.9■■■■□ 3.02
KHSRP-213ENST00000619396 UBXN6Q9BZV1 441 aa33.9■■■■□ 3.02
KHSRP-213ENST00000619396 TBC1D8O95759 1140 aa33.89■■■■□ 3.02
KHSRP-213ENST00000619396 ATP2B4P23634 1241 aa33.89■■■■□ 3.02
KHSRP-213ENST00000619396 PAK1Q13153 545 aa33.89■■■■□ 3.02
KHSRP-213ENST00000619396 GOLGA1Q92805 767 aa33.89■■■■□ 3.02
KHSRP-213ENST00000619396 LONP1P36776 959 aaKnown RBP33.89■■■■□ 3.02
KHSRP-213ENST00000619396 COPB1P53618 953 aaKnown RBP33.89■■■■□ 3.02
KHSRP-213ENST00000619396 CREBRFQ8IUR6 639 aa33.89■■■■□ 3.02
KHSRP-213ENST00000619396 PNMA1Q8ND90 353 aa33.89■■■■□ 3.02
KHSRP-213ENST00000619396 BRWD3Q6RI45 1802 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 POLRMTO00411 1230 aaKnown RBP33.88■■■■□ 3.01
KHSRP-213ENST00000619396 N4BP3O15049 544 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 CALML3P27482 149 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 KIF5BP33176 963 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 SPAG1Q07617 926 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 BLIDQ8IZY5 108 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 KIF5CO60282 957 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 SASH3O75995 380 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 RPN1P04843 607 aaKnown RBP33.88■■■■□ 3.01
KHSRP-213ENST00000619396 PROM2Q8N271 834 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 TBC1D16Q8TBP0 767 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 NELFBQ8WX92 580 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 SH3GLB2Q9NR46 395 aa33.88■■■■□ 3.01
KHSRP-213ENST00000619396 FAM205AQ6ZU69 1335 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 RNF225M0QZC1 329 aaPredicted RBP33.87■■■■□ 3.01
KHSRP-213ENST00000619396 IL1R1P14778 569 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 TCP11X2Q5H9J9 407 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 GPKOWQ92917 476 aaPredicted RBP eCLIP33.87■■■■□ 3.011e-7■■□□□ 13.4
KHSRP-213ENST00000619396 RMND1Q9NWS8 449 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 ERVK-24P63145 666 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 TMTC1Q8IUR5 882 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 VPS16Q9H269 839 aa33.87■■■■□ 3.01
KHSRP-213ENST00000619396 ROBO3Q96MS0 1386 aa33.86■■■■□ 3.01
KHSRP-213ENST00000619396 TSPY3P0CV98 308 aa33.86■■■■□ 3.01
KHSRP-213ENST00000619396 TSPY8P0CW00 308 aa33.86■■■■□ 3.01
KHSRP-213ENST00000619396 SLC27A3Q5K4L6 730 aa33.86■■■■□ 3.01
KHSRP-213ENST00000619396 LDHCP07864 332 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms