RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MROH8Q9H579 483 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 COL11A1P12107 1806 aaPredicted RBP9.72□□□□□ -0.85
NEK3-209ENST00000618856 SLC27A2O14975 620 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 EPB41L2O43491 1005 aaKnown RBP9.71□□□□□ -0.86
NEK3-209ENST00000618856 STRNO43815 780 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 ADCY3O60266 1144 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 ERCC3P19447 782 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 COPB2P35606 906 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 SLC1A4P43007 532 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 STAT2P52630 851 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 ANTXR2P58335 489 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 SLC9C1Q4G0N8 1177 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 MAP3K21Q5TCX8 1036 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 RASGRP2Q7LDG7 609 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 NBPF11Q86T75 865 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 RAET1EQ8TD07 263 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 SH3TC2Q8TF17 1288 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 CHURC1Q8WUH1 139 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 TOMM22Q9NS69 142 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 ZNF536O15090 1300 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 TNKSO95271 1327 aa9.71□□□□□ -0.86
NEK3-209ENST00000618856 MKI67P46013 3256 aaKnown RBP9.71□□□□□ -0.86
NEK3-209ENST00000618856 CCDC85CA6NKD9 419 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 TMEM232C9JQI7 657 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 STAT3P40763 770 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 ZNF543Q08ER8 600 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 COL9A3Q14050 684 aaPredicted RBP9.7□□□□□ -0.86
NEK3-209ENST00000618856 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 TRMT44Q8IYL2 757 aaKnown RBP9.7□□□□□ -0.86
NEK3-209ENST00000618856 NCOA7Q8NI08 942 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 IGDCC4Q8TDY8 1250 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 TRIB2Q92519 343 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 NUDT12Q9BQG2 462 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
NEK3-209ENST00000618856 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 PRR12Q9ULL5 1215 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
NEK3-209ENST00000618856 DNAJC25-GNG10A0A024R161 153 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 ZBED4O75132 1171 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
NEK3-209ENST00000618856 ELNP15502 786 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 RGS2P41220 211 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 TRDNQ13061 729 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
NEK3-209ENST00000618856 CASC1Q6TDU7 716 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 APBA2Q99767 749 aa9.69□□□□□ -0.86
NEK3-209ENST00000618856 PAK6Q9NQU5 681 aaPredicted RBP9.69□□□□□ -0.86
NEK3-209ENST00000618856 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
NEK3-209ENST00000618856 RAD21O60216 631 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 COBLO75128 1261 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 HMGCRP04035 888 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 INHAP05111 366 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 CAPN2P17655 700 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 CYP2B6P20813 491 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 ADORA2AP29274 412 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 HSPA4P34932 840 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 TROAPQ12815 778 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 MTFR1Q15390 333 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 ZNF792Q3KQV3 632 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 OLFML2BQ68BL8 750 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 TTBK2Q6IQ55 1244 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 CHST13Q8NET6 341 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 MAP3K14Q99558 947 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 UBAC1Q9BSL1 405 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 FLRT1Q9NZU1 646 aa9.68□□□□□ -0.86
NEK3-209ENST00000618856 DIS3Q9Y2L1 958 aaKnown RBP9.68□□□□□ -0.86
NEK3-209ENST00000618856 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 ICAM1P05362 532 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 GJB1P08034 283 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 FCER1AP12319 257 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 CCL5P13501 91 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 MCM5P33992 734 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 LIFRP42702 1097 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 UBXN2AP68543 259 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 EXOSC10Q01780 885 aaKnown RBP9.67□□□□□ -0.86
NEK3-209ENST00000618856 TRIM32Q13049 653 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 CCL14Q16627 93 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 TKFCQ3LXA3 575 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 ASPRV1Q53RT3 343 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 IFIT1BQ5T764 474 aaKnown RBP9.67□□□□□ -0.86
NEK3-209ENST00000618856 SYDE2Q5VT97 1194 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 SNRNP48Q6IEG0 339 aaKnown RBP9.67□□□□□ -0.86
NEK3-209ENST00000618856 UBE2Q1Q7Z7E8 422 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 RALYLQ86SE5 291 aaKnown RBP9.67□□□□□ -0.86
NEK3-209ENST00000618856 NCAPG2Q86XI2 1143 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 FBXL16Q8N461 479 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 NPLOC4Q8TAT6 608 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 MTMR8Q96EF0 704 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 MAF1Q9H063 256 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 CRISPLD2Q9H0B8 497 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms