RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
SBDS-205ENST00000617799 PARP1P09874 1014 aaKnown RBP20.06■□□□□ 0.8
SBDS-205ENST00000617799 GOLGA8HP0CJ92 632 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 CPA1P15085 419 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
SBDS-205ENST00000617799 ASPRV1Q53RT3 343 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 GPATCH4Q5T3I0 446 aaKnown RBP20.06■□□□□ 0.8
SBDS-205ENST00000617799 POTEEQ6S8J3 1075 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 OTOP1Q7RTM1 612 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 LY9Q9HBG7 655 aa20.06■□□□□ 0.8
SBDS-205ENST00000617799 SEC24BO95487 1268 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 HOXD10P28358 340 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 SLC16A2P36021 539 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 RBM25P49756 843 aaKnown RBP20.05■□□□□ 0.8
SBDS-205ENST00000617799 Q3C1V9 767 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 TTBK2Q6IQ55 1244 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 TMTC2Q8N394 836 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 NUP133Q8WUM0 1156 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 COA7Q96BR5 231 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 SPATC1LQ9H0A9 340 aa20.05■□□□□ 0.8
SBDS-205ENST00000617799 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
SBDS-205ENST00000617799 GNRH1P01148 92 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 SNHG28P0DPA3 235 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 CTGFP29279 349 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 MAPK4P31152 587 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 CAP1Q01518 475 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 SYDE2Q5VT97 1194 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 ZNF654Q8IZM8 581 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 CPXCR1Q8N123 301 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 C22orf23Q9BZE7 217 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 PORCNQ9H237 461 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 PRR12Q9ULL5 1215 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 ADAMTS5Q9UNA0 930 aa20.04■□□□□ 0.8
SBDS-205ENST00000617799 PLA2G6O60733 806 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 SYNE3Q6ZMZ3 975 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 MYL10Q9BUA6 226 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 MOV10L1Q9BXT6 1211 aaKnown RBP20.03■□□□□ 0.8
SBDS-205ENST00000617799 SLC38A10Q9HBR0 1119 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 RAVER2Q9HCJ3 691 aaKnown RBP20.03■□□□□ 0.8
SBDS-205ENST00000617799 NAP1L2Q9ULW6 460 aaPredicted RBP20.03■□□□□ 0.8
SBDS-205ENST00000617799 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 IVNS1ABPQ9Y6Y0 642 aa20.03■□□□□ 0.8
SBDS-205ENST00000617799 DDAH1O94760 285 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 FDX1P10109 184 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 RPS6KB1P23443 525 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 STAT3P40763 770 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 LIFRP42702 1097 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 SNAP25P60880 206 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.8
SBDS-205ENST00000617799 PKN2Q16513 984 aaKnown RBP20.02■□□□□ 0.8
SBDS-205ENST00000617799 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
SBDS-205ENST00000617799 CCDC174Q6PII3 467 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 CYP46A1Q9Y6A2 500 aa20.02■□□□□ 0.8
SBDS-205ENST00000617799 GRM4Q14833 912 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 IFFO2Q5TF58 517 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 BTNL9Q6UXG8 535 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 PLEKHH3Q7Z736 793 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 REPS2Q8NFH8 660 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 CTCFLQ8NI51 663 aaPredicted RBP20.01■□□□□ 0.79
SBDS-205ENST00000617799 UPF3BQ9BZI7 483 aaKnown RBP20.01■□□□□ 0.79
SBDS-205ENST00000617799 MCOLN1Q9GZU1 580 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 UBA5Q9GZZ9 404 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 CPVLQ9H3G5 476 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 SRRDQ9UH36 339 aa20.01■□□□□ 0.79
SBDS-205ENST00000617799 ZNF214Q9UL59 606 aaPredicted RBP20.01■□□□□ 0.79
SBDS-205ENST00000617799 SLC25A27O95847 323 aa20■□□□□ 0.79
SBDS-205ENST00000617799 CALM1P0DP23 149 aa20■□□□□ 0.79
SBDS-205ENST00000617799 CALM2P0DP24 149 aa20■□□□□ 0.79
SBDS-205ENST00000617799 CALM3P0DP25 149 aa20■□□□□ 0.79
SBDS-205ENST00000617799 ERCC3P19447 782 aa20■□□□□ 0.79
SBDS-205ENST00000617799 COPB2P35606 906 aa20■□□□□ 0.79
SBDS-205ENST00000617799 PRMT2P55345 433 aa20■□□□□ 0.79
SBDS-205ENST00000617799 PRKCZQ05513 592 aa20■□□□□ 0.79
SBDS-205ENST00000617799 TROAPQ12815 778 aa20■□□□□ 0.79
SBDS-205ENST00000617799 FBXO46Q6PJ61 603 aaPredicted RBP20■□□□□ 0.79
SBDS-205ENST00000617799 Q6ZUG5 572 aa20■□□□□ 0.79
SBDS-205ENST00000617799 RUFY3Q7L099 469 aa20■□□□□ 0.79
SBDS-205ENST00000617799 GPR142Q7Z601 462 aa20■□□□□ 0.79
SBDS-205ENST00000617799 MICU3Q86XE3 530 aa20■□□□□ 0.79
SBDS-205ENST00000617799 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
SBDS-205ENST00000617799 RIOX2Q8IUF8 465 aa20■□□□□ 0.79
SBDS-205ENST00000617799 CCDC144CPQ8IYA2 1237 aa20■□□□□ 0.79
SBDS-205ENST00000617799 TNS4Q8IZW8 715 aa20■□□□□ 0.79
SBDS-205ENST00000617799 STAG2Q8N3U4 1231 aa20■□□□□ 0.79
SBDS-205ENST00000617799 SHCBP1Q8NEM2 672 aa20■□□□□ 0.79
SBDS-205ENST00000617799 RAET1EQ8TD07 263 aa20■□□□□ 0.79
SBDS-205ENST00000617799 MROH8Q9H579 483 aa20■□□□□ 0.79
SBDS-205ENST00000617799 ZSWIM6Q9HCJ5 1215 aa20■□□□□ 0.79
SBDS-205ENST00000617799 PTPN22Q9Y2R2 807 aa20■□□□□ 0.79
SBDS-205ENST00000617799 KLF18A0A0U1RQI7 1052 aa19.99■□□□□ 0.79
SBDS-205ENST00000617799 KLRF2D3W0D1 207 aa19.99■□□□□ 0.79
SBDS-205ENST00000617799 RXRAP19793 462 aa19.99■□□□□ 0.79
SBDS-205ENST00000617799 KIF5BP33176 963 aa19.99■□□□□ 0.79
SBDS-205ENST00000617799 OAZ1P54368 228 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms